Rv0005 - c.1533C>G


Drug resistance types
39 Sensitive 1 RR-TB 20 HR-TB 1 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
lineage4.9 70
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3 2
lineage1.1.1 1
lineage2.2.1 5
lineage4 6
lineage4.1.1.3 2
lineage4.1.2.1 4
1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2 3
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage7 2
lineage4.3.2.1 1
lineage1;lineage4.9 1
lineage4.4.1.1 1
lineage4.1;lineage4.9 2
M.canetti;lineage4.9 2
lineage5.1.4 1
lineage4.1.1.3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.3.4.2.1 1
lineage4.5 1
lineage2.2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 123
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR349299 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR2446382 Other lineage4 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR363446 Other lineage4.9 None
SRR12708416 Sensitive None
ERR4819051 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR3275750 Other lineage4.1.2 nl
SRR3675473 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR21689824 Other lineage4.1.2 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR2517475 Other lineage4 None
ERR363500 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR363456 Sensitive lineage4.9 None
ERR349300 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3275450 Other lineage4 None
ERR363499 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR369163 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3275952 Other lineage4.1.2 nl
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR363490 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675260 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR6045503 Other lineage4.9 None
ERR349266 Other lineage4.9 None
ERR369159 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR363449 Other lineage4.9 None
ERR373945 Other lineage4.9 None