EBG00000313325 - n.1003T>C


Drug resistance types
90 Sensitive 1 RR-TB 5 HR-TB 4 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage4.9 70
lineage4.4.1.1 5
lineage4.4.1.1.1 1
lineage4.6.2.2 1
lineage2.2.1 6
lineage4.8 6
lineage4.1.1.3;lineage4.9 2
lineage4.3.2.1 3
lineage4.5 1
lineage4.3.3 4
lineage4 5
lineage2.2;lineage4.5 1
lineage4.1.2 3
lineage4.1.2.1 4
La1.8.1 2
lineage4.7 1
lineage3;lineage4.9 1
lineage1;lineage4.9 1
lineage4.2.1 1
La1.6 1
La1.7.1 1
lineage4.6.4 1
lineage2.2.1;lineage4 1
lineage2.2.2 1
1
lineage4.3.4.1 1
lineage4.3.4.2.1 1
lineage4.1;lineage4.9 2
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363509 Sensitive lineage4.9 None
SRR6982405 Sensitive lineage4.4.1.1 None
ERR363502 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR363447 Other lineage4.9 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
ERR363456 Sensitive lineage4.9 None
SRR6982106 Sensitive lineage4.8 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4811030 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR6044875 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR3275450 Other lineage4 None
ERR363498 Sensitive lineage4.9 None
ERR4831763 HR-TB lineage2.2;lineage4.5 None
ERR4831850 HR-TB lineage4.1.2 vn
SRR2101786 Sensitive lineage4.4.1.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR7236374 Other La1.8.1 None
ERR363421 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR6855718 Sensitive lineage4.8 None
SRR2101681 Sensitive lineage4.8 None
SRR1175508 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR6856032 Sensitive lineage2.2.1 None
ERR2446382 Other lineage4 None
SRR6855915 Sensitive lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR7240506 Other La1.8.1 None
ERR363499 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
SRR3675541 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR6982419 Other lineage4.8 None
SRR6046259 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR2517475 Other lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6981968 Sensitive lineage4.1.2 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
SRR18391683 Other La1.7.1 None
ERR1679641 Other lineage4.6.4 None
SRR2101685 Sensitive lineage4.9 None
SRR6982139 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
SRR3675537 Sensitive lineage4.9 None
SRR2101693 Sensitive lineage4.1.2 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR3675548 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR2101803 Sensitive lineage4.3.3 None
SRR6046564 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR2101816 Other lineage4.8 None
SRR6045503 Sensitive lineage4.9 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982362 Sensitive lineage4.3.2.1 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR363500 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR10796628 Other lineage4.3.3 None
SRR5341296 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR21675637 Sensitive lineage4.3.3 None
ERR2515460 Other lineage4.8 za
SRR3675318 Other lineage4.9 None