EBG00000313339 - n.1419C>A
Drug resistance types
129 Sensitive
17 RR-TB
32 HR-TB
23 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 95 |
| lineage4 | 64 |
| lineage4.2.1 | 2 |
| lineage3 | 8 |
| lineage4.3.3 | 3 |
| lineage4.1.1 | 2 |
| lineage4.8 | 7 |
| lineage1.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.1.2.1 | 6 |
| 14 | |
| lineage4.3.2.1 | 3 |
| lineage4.3.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 24 |
| lineage4.5;lineage2.2 | 1 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.3.2 | 1 |
| lineage5.1.2 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
| lineage1.1.3.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage4.4.2 | 2 |
| La2 | 1 |
| lineage4.4 | 1 |
| lineage4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4;lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 275 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR4818536 | Other | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR4817628 | Sensitive | lineage4.8 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR2514485 | Sensitive | lineage4.6.3 | gb | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4830672 | MDR-TB | lineage4.3.1 | dz | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046555 | Sensitive | lineage3.1.1 | gb | SRR6046802 | Other | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831851 | HR-TB | lineage2.2.1 | vn | ERR485006 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4831826 | MDR-TB | lineage2.2.1 | vn | SRR6785281 | Other | lineage4.2.1.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7496523 | Other | lineage4.7 | None | ERR067712 | HR-TB | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3957939 | Sensitive | lineage4.3.2 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6359070 | Other | lineage4.9 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5864958 | MDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR9125427 | MDR-TB | lineage4.8 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16058235 | MDR-TB | lineage4.8 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR2100537 | Sensitive | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR1750893 | Sensitive | lineage4.9.1 | zw | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR3275450 | Other | lineage4 | None | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR1750885 | Sensitive | lineage2.2.1 | zw | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816470 | Other | lineage3 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None |
|---|
