lineage | Count |
---|---|
lineage4.9 | 129 |
lineage4.5 | 2 |
lineage4 | 6 |
lineage3 | 4 |
lineage4.1.2.1 | 4 |
lineage1.2.2.2 | 1 |
lineage4.9.1 | 1 |
lineage4.4.1.1 | 10 |
lineage2.2.1 | 9 |
lineage1;lineage4.9 | 1 |
lineage4.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.1;lineage4.9 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4 | 2 |
lineage4.8 | 2 |
lineage4.3.2.1 | 2 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage5.1.4 | 1 |
lineage4.1.1.3;lineage4.9 | 2 |
lineage2.2.1;lineage4.9 | 3 |
lineage4.3;lineage4.9 | 1 |
lineage4.8.1 | 1 |
2 | |
lineage1.1.1;lineage4 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2;lineage4.9 | 1 |
lineage2.2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 193 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816852 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR7764389 | Sensitive | lineage4.4.1.1 | None | ERR736831 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4821747 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10969236 | Sensitive | lineage4.4.1.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR369158 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675522 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR400326 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR7764435 | Sensitive | lineage4.4.1.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR3957937 | Sensitive | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4821509 | Sensitive | lineage4.4.1.1 | gb | ERR4769439 | HR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR3675247 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR7361919 | Sensitive | lineage4.4.1.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR4814945 | Sensitive | lineage4.4.1.1 | gb | ERR4816322 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4814685 | Sensitive | lineage4.4.1.1 | gb | ERR400320 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR7764360 | Sensitive | lineage4.4.1.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR11662694 | Other | lineage4.9 | None |
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