Rv2428 - c.477T>C
Drug resistance types
79 Sensitive
3 RR-TB
94 HR-TB
3 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| 91 | |
| lineage4 | 71 |
| lineage2.2.1 | 5 |
| lineage4.9 | 44 |
| lineage2.2.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage2.2 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage1.2.1.1 | 1 |
| lineage3 | 5 |
| lineage4;lineage2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 2 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119669 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR14782405 | HR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18391703 | Other | La1.7.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675510 | Other | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR4037756 | RR-TB | lineage2.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | SRR5341330 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341456 | Other | None | ERR2517475 | Other | lineage4 | None | ERR2693230 | Other | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | SRR6046141 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | La2 | None | ERR4831638 | Sensitive | None | ERR294266 | HR-TB | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283025 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797086 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR4188247 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798431 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None |
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