Rv0006 - c.306C>T
Drug resistance types
27 Sensitive
0 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4 | 43 |
| lineage4.9;lineage6.3 | 4 |
| lineage4.1.2.1 | 3 |
| lineage1;lineage4.9 | 1 |
| 4 | |
| lineage4.9 | 20 |
| La3;lineage4.8 | 1 |
| lineage4 | 4 |
| lineage1.2.2.1 | 3 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3 | 2 |
| La3;lineage4.9 | 2 |
| lineage4.8 | 2 |
| lineage2.2.1 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.5 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR7240297 | HR-TB | La1.7.X-unk4 | None |
| ERR13265528 | Other | lineage4.9;lineage6.3 | None |
| ERR3445486 | Other | La1.7.X-unk4 | None |
| SRR3675232 | Other | lineage4.1.2.1 | None |
| ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
| ERR3445500 | Other | La1.7.X-unk4 | None |
| ERR4407463 | HR-TB | None | |
| ERR3445495 | Other | La1.7.X-unk4 | None |
| ERR4811030 | Sensitive | lineage4.9 | None |
| ERR4817893 | Other | La3;lineage4.8 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| ERR2815541 | Other | La1.7.X-unk4 | None |
| SRR7851366 | Other | La1.7.X-unk4 | None |
| ERR3275450 | Other | lineage4 | None |
| ERR11068019 | HR-TB | lineage1.2.2.1 | None |
| SRR3675279 | Sensitive | lineage4.9 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| ERR2027263 | Other | lineage4 | None |
| SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
| SRR12708398 | Sensitive | lineage4.4.1.1 | None |
| SRR6789626 | Other | None | |
| ERR2815551 | Other | La1.7.X-unk4 | None |
| SRR13046668 | Other | La1.7.X-unk4 | None |
| ERR2514552 | Sensitive | lineage3 | None |
| SRR29017461 | Other | La3;lineage4.9 | None |
| ERR9787388 | Other | La1.7.X-unk4 | None |
| ERR3445491 | Other | La1.7.X-unk4 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| SRR3675387 | Other | lineage4.9 | None |
| SRR13046670 | Other | La1.7.X-unk4 | None |
| ERR4812155 | Other | lineage4.9 | None |
| SRR5341437 | Sensitive | lineage4.9 | None |
| ERR11068020 | HR-TB | lineage1.2.2.1 | None |
| ERR3445497 | Other | La1.7.X-unk4 | None |
| ERR2229542 | Other | lineage4.8 | None |
| ERR3445490 | Other | La1.7.X-unk4 | None |
| SRR2010299 | MDR-TB | lineage2.2.1 | None |
| ERR3445496 | Other | La1.7.X-unk4 | None |
| SRR13046685 | Other | La1.7.X-unk4 | None |
| ERR4817060 | Other | None | |
| SRR13046678 | Other | La1.7.X-unk4 | None |
| ERR551191 | Other | La1.7.X-unk4 | de |
| SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
| ERR2815561 | Other | La1.7.X-unk4 | None |
| ERR11049069 | Other | La1.7.X-unk4 | None |
| SRR13046672 | Other | La1.7.X-unk4 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR3445498 | Other | La1.7.X-unk4 | None |
| ERR3906063 | Other | La1.7.X-unk4 | None |
| SRR3675580 | Sensitive | lineage4.9 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR400320 | Sensitive | lineage4.9 | None |
| ERR4817735 | Other | lineage4.8 | None |
| ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR12708384 | Sensitive | lineage4.9 | None |
| SRR26399973 | Other | La3;lineage4.9 | None |
| SRR5341296 | Sensitive | lineage4.9 | None |
| SRR1169194 | Other | lineage4.9 | None |
| ERR2513555 | Sensitive | lineage3 | gb |
| ERR4821686 | Sensitive | lineage4.1.2.1 | None |
| SRR6044790 | Other | lineage2.1;lineage4.9 | None |
| ERR3445492 | Other | La1.7.X-unk4 | None |
| ERR3445494 | Other | La1.7.X-unk4 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR7240428 | HR-TB | La1.7.X-unk4 | None |
| SRR13046676 | Other | La1.7.X-unk4 | None |
| ERR3445499 | Other | La1.7.X-unk4 | None |
| ERR3445489 | Other | La1.7.X-unk4 | None |
| ERR400345 | Other | lineage4.9 | None |
| SRR13046689 | Other | La1.7.X-unk4 | None |
| SRR29356738 | Other | La1.7.X-unk4 | None |
| SRR1175508 | Sensitive | lineage4.9 | None |
| SRR13046679 | Other | La1.7.X-unk4 | None |
| ERR400326 | Other | lineage4.9 | None |
| SRR6046245 | Other | lineage4.9 | None |
| ERR400336 | Sensitive | lineage4.9 | None |
| ERR176793 | Other | lineage4.1.1.1 | None |
| ERR2446382 | Other | lineage4 | None |
| SRR6046564 | Sensitive | lineage4.9 | None |
| SRR1165699 | Other | lineage4.9 | None |
| ERR2815589 | Other | La1.7.X-unk4 | None |
| SRR29356760 | Other | La1.7.X-unk4 | None |
| SRR12708372 | Sensitive | lineage4.9 | None |
| ERR2815574 | Other | La1.7.X-unk4 | None |
| ERR3445487 | Other | La1.7.X-unk4 | None |
| ERR2815572 | Other | La1.7.X-unk4 | None |
| ERR3445485 | Other | La1.7.X-unk4 | None |
| ERR3445493 | Other | La1.7.X-unk4 | None |
| SRR13046684 | Other | La1.7.X-unk4 | None |
| ERR11068648 | HR-TB | lineage1.2.2.1 | None |
| ERR4797054 | Pre-XDR-TB | lineage2.1 | None |
| SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None |
| ERR11050090 | Other | La1.7.X-unk4 | None |
| SRR13046688 | Other | La1.7.X-unk4 | None |
| ERR3445488 | Other | La1.7.X-unk4 | None |
| SRR12708416 | Sensitive | None | |
| SRR5341396 | Other | lineage3;lineage4.9 | None |
| ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
| ERR2513283 | Sensitive | lineage5.1.4 | None |
| SRR7131023 | Other | lineage4.1.2.1 | None |
| ERR2517475 | Other | lineage4 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR176549 | Other | lineage4.3.4.2.1 | None |
| SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
| SRR1165667 | Other | lineage4.9;lineage6.3 | None |
| SRR13046681 | Other | La1.7.X-unk4 | None |
