Rv0006 - c.306C>T
Drug resistance types
26 Sensitive
0 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4 | 43 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| 4 | |
| lineage4.9 | 19 |
| lineage4 | 4 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 4 |
| La3;lineage4.8 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage1.2.2.1 | 2 |
| lineage3 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3445494 | Other | La1.7.X-unk4 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR3445499 | Other | La1.7.X-unk4 | None | SRR6789626 | Other | None | SRR13046679 | Other | La1.7.X-unk4 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR9787388 | Other | La1.7.X-unk4 | None | ERR3445491 | Other | La1.7.X-unk4 | None | ERR4812155 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445485 | Other | La1.7.X-unk4 | None | ERR3445497 | Other | La1.7.X-unk4 | None | SRR13046688 | Other | La1.7.X-unk4 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR13046685 | Other | La1.7.X-unk4 | None | ERR4817060 | Other | None | SRR13046678 | Other | La1.7.X-unk4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR2815561 | Other | La1.7.X-unk4 | None | ERR3445500 | Other | La1.7.X-unk4 | None | ERR3445495 | Other | La1.7.X-unk4 | None | ERR3445498 | Other | La1.7.X-unk4 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR2815541 | Other | La1.7.X-unk4 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR3445492 | Other | La1.7.X-unk4 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR400345 | Other | lineage4.9 | None | SRR13046689 | Other | La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR2815589 | Other | La1.7.X-unk4 | None | SRR3675387 | Other | lineage4.9 | None | ERR2815574 | Other | La1.7.X-unk4 | None | ERR2815572 | Other | La1.7.X-unk4 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR13046684 | Other | La1.7.X-unk4 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR11050090 | Other | La1.7.X-unk4 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR551191 | Other | La1.7.X-unk4 | de | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR29356738 | Other | La1.7.X-unk4 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR7851366 | Other | La1.7.X-unk4 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR11068019 | HR-TB | lineage1.2.2.1 | None | ERR2513555 | Sensitive | lineage3 | gb | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR7240428 | HR-TB | La1.7.X-unk4 | None | SRR13046676 | Other | La1.7.X-unk4 | None | ERR3445489 | Other | La1.7.X-unk4 | None | ERR2815551 | Other | La1.7.X-unk4 | None | SRR6046245 | Other | lineage4.9 | None | SRR13046668 | Other | La1.7.X-unk4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR1165699 | Other | lineage4.9 | None | SRR29356760 | Other | La1.7.X-unk4 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR13046670 | Other | La1.7.X-unk4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR3445493 | Other | La1.7.X-unk4 | None | ERR11068648 | HR-TB | lineage1.2.2.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR3445490 | Other | La1.7.X-unk4 | None | ERR3445488 | Other | La1.7.X-unk4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR3445496 | Other | La1.7.X-unk4 | None | ERR2517475 | Other | lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR13046681 | Other | La1.7.X-unk4 | None | SRR7240297 | HR-TB | La1.7.X-unk4 | None | ERR3445486 | Other | La1.7.X-unk4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR11049069 | Other | La1.7.X-unk4 | None | SRR13046672 | Other | La1.7.X-unk4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR3275450 | Other | lineage4 | None | ERR3906063 | Other | La1.7.X-unk4 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1169194 | Other | lineage4.9 | None |
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