Rv0006 - c.306C>T
Drug resistance types
27 Sensitive
1 RR-TB
10 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| 16 | |
| lineage4 | 14 |
| La1.7.X-unk4 | 39 |
| lineage2.2.1 | 3 |
| lineage1.2.2.1 | 3 |
| lineage4.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 2 |
| lineage5.1.4 | 1 |
| lineage4.8;La3 | 1 |
| lineage3 | 2 |
| lineage2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175496 | HR-TB | lineage4.9 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13046670 | Other | La1.7.X-unk4 | None | SRR13046668 | Other | La1.7.X-unk4 | None | SRR13046672 | Other | La1.7.X-unk4 | None | SRR13046678 | Other | La1.7.X-unk4 | None | SRR13046679 | Other | La1.7.X-unk4 | None | SRR13046681 | Other | La1.7.X-unk4 | None | SRR13046676 | Other | La1.7.X-unk4 | None | SRR13046685 | Other | La1.7.X-unk4 | None | SRR13046684 | Other | La1.7.X-unk4 | None | SRR13046688 | Other | La1.7.X-unk4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR13046689 | Other | La1.7.X-unk4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068020 | HR-TB | lineage1.2.2.1 | None | ERR11068648 | HR-TB | lineage1.2.2.1 | None | ERR11068019 | HR-TB | lineage1.2.2.1 | None | ERR8025743 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675229 | Other | lineage4 | None | ERR3275450 | Other | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR2027263 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341302 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR551191 | Other | La1.7.X-unk4 | de | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044790 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2815572 | Other | La1.7.X-unk4 | None | ERR2815551 | Other | La1.7.X-unk4 | None | SRR6046245 | Other | lineage4.9 | None | ERR2815541 | Other | La1.7.X-unk4 | None | ERR2815561 | Other | La1.7.X-unk4 | None | ERR4831638 | Sensitive | None | ERR2815574 | Other | La1.7.X-unk4 | None | ERR2815589 | Other | La1.7.X-unk4 | None | ERR502943 | HR-TB | None | SRR6789626 | Other | None | SRR7851366 | Other | La1.7.X-unk4 | None | ERR3445485 | Other | La1.7.X-unk4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR11049069 | Other | La1.7.X-unk4 | None | ERR3445490 | Other | La1.7.X-unk4 | None | ERR3445492 | Other | La1.7.X-unk4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445488 | Other | La1.7.X-unk4 | None | ERR3445491 | Other | La1.7.X-unk4 | None | ERR3445498 | Other | La1.7.X-unk4 | None | ERR3445497 | Other | La1.7.X-unk4 | None | ERR3445486 | Other | La1.7.X-unk4 | None | ERR3445489 | Other | La1.7.X-unk4 | None | ERR3445495 | Other | La1.7.X-unk4 | None | ERR3445493 | Other | La1.7.X-unk4 | None | ERR3445499 | Other | La1.7.X-unk4 | None | ERR3445496 | Other | La1.7.X-unk4 | None | ERR3445494 | Other | La1.7.X-unk4 | None | ERR3445500 | Other | La1.7.X-unk4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3906063 | Other | La1.7.X-unk4 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR2513555 | Sensitive | lineage3 | gb | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797313 | HR-TB | None | ERR9787388 | Other | La1.7.X-unk4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR736874 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR11050090 | Other | La1.7.X-unk4 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None |
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