Rv0668 - c.2559C>G


Drug resistance types
102 Sensitive 21 RR-TB 65 HR-TB 49 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 75 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage6.3 1
lineage4.9 111
lineage4.1.2.1.1 1
M.canetti;lineage2.1;lineage4.9 24
lineage2.1;lineage4.9 5
M.canetti;lineage4.9 3
lineage2.2.1 17
lineage4.3.2.1 2
lineage4.3.3 5
lineage4.1.2.1 14
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 5
lineage4.2;lineage4.8.1;lineage4.9 2
lineage1.2.1.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 12
La1.2.BCG 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.9 3
lineage4.1;lineage4.8 2
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.2 3
lineage4.2.1 1
lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.1.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
lineage4.8 4
lineage2.2.2 2
lineage4 8
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3 4
lineage2.2.1;lineage4 2
lineage4.1.1.3 2
lineage4.1;lineage4.9 2
lineage4.4.1.1 3
lineage4.6.2.2 2
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage1 1
lineage4.9;lineage9 1
La1.8.1 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
4
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage5.1.4 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;M.canetti;lineage4.9 2
lineage4.5 2
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4 1
lineage4.3.4.2.1 2
lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage3;lineage4.9 1
lineage1.1 1
lineage1.1.1;lineage4 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
La1.7.1 1
lineage1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 316
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675541 Sensitive lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR3675229 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363447 Other lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6831950 Sensitive lineage4.3.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1180413 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR20632814 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR1162864 Other lineage4.1.2.1 None
SRR13861396 HR-TB lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675477 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045503 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363500 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18289200 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811030 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR2514327 HR-TB lineage4.8 None
SRR069978 HR-TB lineage2.2.2 None
ERR3275450 Other lineage4 None
ERR369158 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045191 Sensitive lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1175487 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR9786444 Sensitive lineage4.8 None
SRR13861153 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR363426 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4178226 Sensitive lineage4 None
ERR4797588 MDR-TB lineage3 None
SRR1175508 Sensitive lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR1791696 Other La1.8.1 None
ERR2446382 Other lineage4 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR349296 Sensitive lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR3675383 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2517475 Other lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6044815 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369163 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR3675482 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675292 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR13423544 Other lineage4.5 None
SRR3675387 Other lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
SRR13861305 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR369159 Sensitive lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR369151 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675580 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR349300 Sensitive lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR363474 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12708392 Other lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR9786619 Sensitive lineage4.8 None
ERR990545 Other lineage3 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None