TB-Profiler
Home
Upload
SRA data
Rv0407
- c.330G>C
Drug resistance types
10 Sensitive
2 RR-TB
9 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
12
lineage2.2.1
5
lineage2.2.1.1
3
lineage4.2;lineage4.8.1;lineage4.9
2
1
lineage1.1.1;lineage4
1
lineage1;lineage4.9
1
lineage4.5
1
lineage2.2.1;lineage4
1
lineage4.9;lineage6.3
1
Showing 1 to 10 of 14 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
32
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR294266
HR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
ERR400320
Sensitive
lineage4.9
None
ERR400326
Other
lineage4.9
None
ERR4797350
Sensitive
lineage1;lineage4.9
None
ERR4811030
Sensitive
lineage4.9
None
ERR4811031
Sensitive
lineage4.5
None
ERR4812155
Other
lineage4.9
None
ERR4831638
Sensitive
lineage1.1.1;lineage4
None
Showing 1 to 10 of 32 entries
Previous
1
2
3
4
Next