EBG00000313325 - n.1015C>T
Drug resistance types
77 Sensitive
23 RR-TB
12 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage4.9 | 78 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.4.2 | 2 |
| lineage4.8 | 36 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.2.1 | 3 |
| lineage2.2.1 | 8 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.5 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage3 | 3 |
| lineage4.4.1.1 | 2 |
| lineage1.1.1 | 1 |
| 1 | |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6865502 | Sensitive | lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR20969825 | HR-TB | lineage4.4.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR3675542 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR978756 | Other | lineage4.8 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR978752 | Other | lineage4.8 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR349299 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR11466303 | Sensitive | lineage4.3.4.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR3675318 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978747 | Other | lineage4.8 | None | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR911929 | Other | lineage4.8 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR373947 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4820586 | Other | lineage3 | gb | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR2517475 | Other | lineage4 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR369162 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4831850 | HR-TB | lineage4.1.2 | vn | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
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