Rv0529 - c.531G>C
Drug resistance types
16 Sensitive
3 RR-TB
24 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 5 |
| lineage4.9 | 35 |
| lineage4 | 2 |
| lineage2.1;lineage4.9 | 11 |
| lineage2.2.1 | 9 |
| lineage4.8 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage5.1.4 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| 15 | |
| lineage4.9;lineage6.3 | 5 |
| La3;lineage4.8 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La3;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.1.1.1 | 1 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage1.2.1.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR3675572 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR4815604 | Other | None | ERR9117709 | Other | None | SRR6789626 | Other | None | ERR234659 | HR-TB | None | SRR18213713 | HR-TB | None | ERR4407463 | HR-TB | None | SRR3675275 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173400 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1196546 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1175074 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR4818615 | Sensitive | None | SRR1184372 | MDR-TB | None | ERR4816999 | Other | None | ERR4817060 | Other | None | SRR12708416 | Sensitive | None | SRR28119777 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
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