Rv1305 - c.141G>C
Drug resistance types
84 Sensitive
4 RR-TB
128 HR-TB
16 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
86 Other
lineage Counts
| lineage | Count |
|---|---|
| 135 | |
| lineage4.9 | 41 |
| lineage4 | 71 |
| La1.8.1 | 3 |
| La1 | 1 |
| lineage2.2.1 | 16 |
| lineage2.2 | 5 |
| lineage4.5 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.2.1 | 12 |
| lineage1.1.3.1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1 | 3 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage2.1 | 2 |
| lineage4.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage3 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 324 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3445501 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3468544 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4811142 | MDR-TB | None | ERR6866022 | Other | None | ERR6198317 | Other | La1.2 | None | ERR6336782 | Other | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR6866639 | Other | None | ERR702406 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9634265 | Sensitive | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786671 | Other | None | ERR987722 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1183049 | Other | lineage2.2 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12142341 | HR-TB | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR14801749 | Sensitive | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | ERR181744 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | ERR3275450 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675279 | Other | None | SRR3675510 | Other | None | ERR181887 | HR-TB | None | SRR3675387 | Sensitive | None | ERR176751 | HR-TB | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675558 | HR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816656 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818929 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR2693231 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2517475 | Other | lineage4 | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045526 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6325442 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6325444 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None |
|---|
