lineage | Count |
---|---|
lineage4.3.3 | 2 |
lineage4.9 | 58 |
lineage4.8 | 1 |
lineage4 | 4 |
lineage2.2.1 | 6 |
lineage2.2 | 1 |
lineage4.1.2.1 | 2 |
lineage1;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2.2 | 1 |
lineage4.6.1.2 | 1 |
La1;lineage4.9 | 1 |
La3;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
2 | |
lineage4.1;lineage4.9 | 2 |
lineage4.5 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.4.1.1 | 1 |
La1.2.BCG | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage3 | 1 |
lineage4.1.1.3;lineage4.9 | 2 |
lineage4.7 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6046245 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4796577 | HR-TB | None | SRR30182471 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675522 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR3675270 | Other | lineage4.9 | None |
---|