Rv0407 - c.315G>C
Drug resistance types
33 Sensitive
0 RR-TB
76 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| 90 | |
| lineage2.2.1 | 8 |
| lineage4 | 19 |
| lineage4.3 | 1 |
| lineage2.2 | 3 |
| La1.8.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2.1 | 10 |
| La2 | 1 |
| lineage4.7 | 2 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage3 | 3 |
| lineage2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 2 |
| La1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675236 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR176751 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | ERR212001 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4816656 | HR-TB | None | SRR7496472 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341456 | Other | None | SRR6045526 | HR-TB | None | ERR2446382 | Other | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR5341302 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR4830353 | Other | None | ERR502943 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR294266 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496517 | Other | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323053 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283047 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR4407463 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736867 | HR-TB | None | ERR736865 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR1167384 | Other | lineage4 | None | ERR987722 | HR-TB | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1173778 | Other | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR13837800 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR17658565 | Other | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None |
|---|
