Rv0668 - c.-108C>T
Drug resistance types
18 Sensitive
1 RR-TB
24 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.9 | 32 |
| lineage2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 2 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| La1;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
|---|
