Rv3457c - c.-410G>C


Drug resistance types
9 Sensitive 18 RR-TB 47 HR-TB 85 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
lineage6.1.3 1
lineage4.9 65
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage3 4
La3;M.canetti;lineage2.1;lineage4.9 11
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
lineage1.1.3.1 1
lineage4 1
3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 4
La1.7;M.canetti;lineage4.9 3
lineage4.8 3
lineage4.3.4.2.1 1
lineage2.2.1 7
M.canetti;lineage2.1;lineage4 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 2
lineage2.2 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.1.2.1 5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.2 1
La1;lineage2;lineage4.9 1
La1.8.1 2
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7;lineage4.9 4
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.9;lineage7 2
La3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage5.1.4 1
lineage2.2.1.2 1
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.5 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage6.3 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.4.1.2 1
La1.7.1 1
La1.2.BCG 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.9;lineage6.3 1
La1.7 1
La1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 220
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787153 Other lineage6.1.3 None
ERR4769452 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
DRR188519 Other lineage4.4.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
SRR1640750 RR-TB None
ERR212001 HR-TB None
ERR400529 Other lineage3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR5341330 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6044815 RR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR971389 Other lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046878 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR1791696 RR-TB La1.8.1 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2446566 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR2514692 Other None
ERR752229 Other lineage4.5 None
ERR3797029 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR779852 HR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR5535933 Other lineage4.9 None
SRR12416829 MDR-TB lineage2.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR926165 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR926156 Other lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
ERR2229143 RR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR108471 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None