EBG00000313339 - n.267_268insT
Drug resistance types
132 Sensitive
4 RR-TB
79 HR-TB
21 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 2 |
| lineage4.9 | 44 |
| lineage3 | 2 |
| lineage2.2.1 | 16 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4 | 100 |
| lineage4.1 | 3 |
| 96 | |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.1.1 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| La1.8.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.8 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| La2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.3.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage5.1.2 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| La1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage6.1.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 325 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969708 | HR-TB | lineage2.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR3275450 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176740 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR176751 | HR-TB | None | SRR3675502 | Other | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816110 | Sensitive | lineage4.9 | gb | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | ERR4816291 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR5341366 | Sensitive | lineage4 | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341453 | Sensitive | None | ERR2514191 | Other | La1.8.1 | gb | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR1023509 | Other | None | ERR2446382 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR5341470 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | SRR6045233 | HR-TB | None | ERR2693257 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046482 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4831117 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4832052 | HR-TB | lineage2.1 | vn | ERR502510 | Sensitive | lineage4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR6785315 | Sensitive | lineage4.3.3 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR502943 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR323085 | Sensitive | lineage4 | None | ERR027293 | Other | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035122 | Sensitive | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035296 | HR-TB | lineage4.9 | br | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1063896 | Sensitive | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035353 | MDR-TB | lineage4.4.1.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1063883 | Sensitive | lineage4 | None | ERR1213875 | Other | lineage4.3.3 | de | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR1213911 | Sensitive | lineage4.3.4.2 | es | ERR1213930 | Other | lineage4.3.2 | pe | ERR3273109 | MDR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR373947 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797061 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR387051 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4796577 | MDR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4772225 | Other | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798504 | Other | lineage3 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None |
|---|
