EBG00000313339 - n.267_268insT
Drug resistance types
43 Sensitive
5 RR-TB
65 HR-TB
33 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 2 |
| lineage4.9 | 121 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.2.1 | 6 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 3 | |
| lineage4.5 | 2 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2.1 | 10 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
| lineage6.1.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.2;La1.8.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.3.4.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR736856 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR369162 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR6045706 | Other | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1158918 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR736834 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR926154 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363479 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR363446 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR363449 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR1035296 | HR-TB | lineage4.9 | br | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR926165 | Other | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR349265 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR363498 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR363490 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None |
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