EBG00000313325 - n.482G>A
Drug resistance types
11 Sensitive
4 RR-TB
37 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 54 |
| La1.8.1 | 4 |
| lineage2.2.1 | 6 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage6.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.9 | 2 |
| La1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2 | 3 |
| lineage1.1.1 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage6 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.8 | 3 |
| La2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 115 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046046 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811031 | Other | lineage4.5 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR9787362 | Sensitive | lineage6 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4769450 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045548 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR736817 | HR-TB | lineage4.3.4 | None |
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