Rv3596c - c.405C>T


Drug resistance types
35 Sensitive 1 RR-TB 16 HR-TB 12 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 32 Other
lineage Counts
lineage Count
lineage4.9 43
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.2.1 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1 4
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage1;lineage4.9 1
lineage4.5 2
lineage2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.3.1;lineage4.9;lineage6 1
lineage2.1;lineage4.9 1
La2;lineage4.9 1
lineage1.1.1.1 1
La1.2;La1.8.1 1
La3;lineage4.3.4 1
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 1
2
lineage1.1.1;lineage4 1
lineage5.1.4 1
La1.7;lineage4.9 2
lineage4.9;lineage7 1
La1.6;lineage4 1
lineage4.9;lineage6.1.3 1
lineage4.3.4.2.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.3.4.2 2
lineage4.1.1.3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2.1.1;lineage4.3.3 1
La1.7.X-unk4;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 97
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283021 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR400320 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR26399491 Sensitive lineage1.1.1.1 None
ERR736856 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR363449 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR400326 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR473332 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12708416 Sensitive None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513283 Sensitive lineage5.1.4 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR4815878 Sensitive lineage4.5 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR6866807 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4796577 HR-TB None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675522 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR6046245 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6480529 Sensitive lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR369159 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161037 Other lineage4.9 None