lineage | Count |
---|---|
lineage4 | 57 |
lineage4.9 | 35 |
39 | |
La1.2 | 1 |
lineage4.5 | 2 |
lineage2.2 | 2 |
lineage4.3.4.2 | 2 |
lineage4.1.2.1 | 3 |
lineage2.2.1 | 6 |
lineage4.1 | 2 |
lineage4.3.4 | 1 |
lineage1.1.1.1 | 1 |
lineage5.1.4 | 1 |
lineage3 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 157 |
ID | Drug resistance | Lineage | Country iso2 | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4797313 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR736856 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | SRR1175507 | MDR-TB | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | ERR181744 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675547 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4815878 | Sensitive | lineage4.5 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | ERR2446566 | Other | lineage4.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR2514929 | HR-TB | lineage1.1.2 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341323 | Sensitive | lineage4 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046824 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046617 | HR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6480529 | Sensitive | lineage4.3.3 | None | ERR4831638 | Sensitive | None | SRR9971114 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR502943 | HR-TB | None | SRR8217918 | HR-TB | None | ERR1063857 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None |
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