EBG00000313339 - n.3009C>T


Drug resistance types
97 Sensitive 3 RR-TB 30 HR-TB 9 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 40 Other
lineage Counts
lineage Count
lineage4.3.2.1 2
lineage4.9 117
lineage2.2.2 1
lineage4.1.2.1 3
lineage2.2.1 9
lineage2.2.1.1 1
lineage3 4
lineage4 3
lineage1.1.1 2
lineage2.2.1;lineage4.9 2
2
La1.3 3
lineage4.4.1.1.1 2
lineage4.1;lineage4.9 1
La3;M.canetti;lineage4.9 1
lineage2.2.1;lineage4 2
lineage4.8.1 1
lineage4.8 2
La1.7;lineage4.9 1
La1.2.BCG 2
lineage4.3.3 4
La1;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage4.6.1.1 2
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1.2 1
lineage2;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.1.1.3 2
lineage4.4.1.1 1
La1.2;La1.8.1 1
lineage1.2.2.2 1
lineage4.9;lineage7 1
lineage4.7 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 184
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR970441 RR-TB lineage2.2.1.1 None
SRR5341323 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR3675541 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR718318 HR-TB lineage1.1.1 th
SRR1180413 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708416 Sensitive None
ERR4769555 Sensitive La1.3 None
SRR1181402 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1180250 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6044875 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR2513259 Other lineage3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR349300 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1175508 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR926159 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
ERR4769514 Other La1.3 None
ERR3797081 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR6359070 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR970445 MDR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR6045832 Other lineage4.9 None
ERR4796577 HR-TB None
ERR4816322 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR369162 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR1175496 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1172717 Sensitive lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR926162 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR1184021 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR7911071 Sensitive lineage4.3.3 za
SRR1180420 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SRR3675582 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR473334 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR768010 Sensitive lineage1.1.1 th
SRR20632814 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926169 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
ERR387051 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR363498 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR363506 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None