Rv0006 - c.1677C>T


Drug resistance types
206 Sensitive 13 RR-TB 14 HR-TB 19 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage4.3.3;lineage4.3.4.2;lineage4.9.1 1
lineage4.9.1 216
M.canetti;lineage4.9 1
lineage4.9 30
lineage1;lineage4.9 1
La3;lineage4.3.4 1
lineage4.5 1
lineage3 1
lineage1.1.3.2 1
lineage2.2.1 4
lineage4 3
lineage4.3.4.1;lineage4.9 1
lineage3;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2.1 1
lineage2.2.1;lineage4.9.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.4.1.1;lineage4.9.1 3
lineage1.1.1;lineage4 1
lineage4.1.1.3;lineage4.9 1
lineage4.2.1 1
lineage4.1.1.3;lineage4.9.1 1
lineage4.2.2 1
lineage4.9;lineage6.3 1
La3;lineage4.9 1
lineage2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage3.1;lineage4.9.1 1
lineage5.1.4 1
1
lineage2.2.2 1
lineage2.2.1;lineage4 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 284
Geographic prevalence
Country level data for this variant is available for 78 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19428606 Sensitive lineage4.3.3;lineage4.3.4.2;lineage4.9.1 None
ERR11465183 Sensitive lineage4.9.1 None
ERR2515585 Pre-XDR-TB lineage4.9.1 za
ERR126610 Sensitive lineage4.9.1 mw
ERR2516695 MDR-TB lineage4.9.1 nl
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR11488480 HR-TB lineage4.9.1 None
ERR11466039 Sensitive lineage4.9.1 None
ERR2660423 Sensitive lineage4.9.1 None
ERR11465322 Sensitive lineage4.9.1 None
ERR11466482 Sensitive lineage4.9.1 None
ERR400345 Other lineage4.9 None
ERR221595 Other lineage4.9.1 mw
ERR216928 Other lineage4.9.1 None
ERR036191 Sensitive lineage4.9.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR5918059 Sensitive lineage4.9.1 za
ERR161039 HR-TB La3;lineage4.3.4 None
ERR2512392 Sensitive lineage4.9.1 gb
ERR161042 Sensitive lineage4.9.1 mw
ERR4811031 Other lineage4.5 None
ERR2515329 RR-TB lineage4.9.1 za
SRR21732393 Sensitive lineage3 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6982415 Other lineage4.9.1 None
ERR400326 Other lineage4.9 None
ERR11465960 Sensitive lineage4.9.1 None
ERR11466556 Sensitive lineage4.9.1 None
SRR6982529 MDR-TB lineage4.9.1 None
ERR736840 Sensitive lineage4.9.1 None
SRR6982550 Sensitive lineage4.9.1 None
SRR3675522 Other lineage4.9 None
SRR6896329 Sensitive lineage4.9.1 None
ERR037509 Sensitive lineage4.9.1 mw
ERR11466264 RR-TB lineage4.9.1 None
ERR037468 Sensitive lineage4.9.1 mw
ERR11465315 Sensitive lineage4.9.1 None
ERR11465989 Sensitive lineage4.9.1 None
ERR7801290 Sensitive lineage4.9.1 None
ERR11465131 Sensitive lineage4.9.1 None
ERR11465884 Sensitive lineage4.9.1 None
SRR6896547 Sensitive lineage4.9.1 None
ERR212082 Sensitive lineage4.9.1 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR245810 Sensitive lineage4.9.1 None
ERR11465669 Sensitive lineage4.9.1 None
SRR2100547 Sensitive lineage4.9.1 None
ERR037517 Sensitive lineage4.9.1 mw
ERR5908174 Sensitive lineage4.9.1 None
ERR7821126 Other lineage1.1.3.2 None
ERR7801300 HR-TB lineage4.9.1 None
ERR036219 Sensitive lineage4.9.1 mw
ERR4797313 Sensitive lineage2.2.1 None
ERR11466157 Sensitive lineage4.9.1 None
ERR161196 Sensitive lineage4.9.1 mw
ERR11466409 Sensitive lineage4.9.1 None
SRR6896538 Sensitive lineage4.9.1 None
ERR11465189 RR-TB lineage4.9.1 None
ERR8975415 Sensitive lineage4.9.1 None
ERR7737766 RR-TB lineage4.9.1 None
ERR1750903 Sensitive lineage4.9.1 za
ERR212158 HR-TB lineage4.9.1 mw
ERR2446382 Other lineage4 None
ERR11465547 Sensitive lineage4.9.1 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
ERR11067648 Sensitive lineage4.9.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR11488328 MDR-TB lineage4.9.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6982488 Sensitive lineage4.9.1 None
ERR245685 Sensitive lineage4.9.1 mw
ERR245731 Sensitive lineage4.9.1 mw
ERR11044587 Other lineage4.9.1 None
ERR323076 Sensitive lineage4.9.1 mw
ERR11252484 Sensitive lineage4.9.1 None
ERR11775060 MDR-TB lineage4.9.1 None
ERR11252585 Sensitive lineage4.9.1 None
ERR190396 Sensitive lineage4.9.1 mw
ERR190392 Sensitive lineage4.9.1 mw
ERR2515338 Sensitive lineage4.9.1 za
ERR2515967 Sensitive lineage4.9.1 za
ERR2200017 Sensitive lineage4.9.1 sz
ERR181967 Sensitive lineage4.9.1 mw
ERR4809012 RR-TB lineage4.9.1 za
ERR11466179 Sensitive lineage4.9.1 None
ERR176529 Sensitive lineage4.9.1 mw
ERR216975 Sensitive lineage4.9.1 None
ERR2200005 Sensitive lineage4.9.1 sz
ERR176598 Sensitive lineage4.9.1 mw
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2515225 MDR-TB lineage4.9.1 za
SRR2100439 Sensitive lineage4.9.1 None
ERR11465064 Sensitive lineage4.9.1 None
ERR11465952 Sensitive lineage4.9.1 None
ERR1750904 Sensitive lineage4.9.1 za
ERR11466555 Sensitive lineage4.9.1 None
ERR4010975 Sensitive lineage4.9.1 None
ERR245714 Sensitive lineage4.9.1 mw
ERR11466078 Sensitive lineage4.9.1 None
ERR176538 Sensitive lineage4.9.1 mw
SRR10869266 Sensitive lineage4.9.1 None
ERR11465393 Sensitive lineage4.9.1 None
ERR7801258 Sensitive lineage4.9.1 None
ERR11465337 Sensitive lineage4.9.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2515520 MDR-TB lineage4.9.1 za
ERR11488668 Pre-XDR-TB lineage4.9.1 None
ERR9119906 MDR-TB lineage2.2.1;lineage4.9.1 None
ERR11465761 Sensitive lineage4.9.1 None
SRR6046564 Sensitive lineage4.9 None
ERR2515528 MDR-TB lineage4.9.1 za
ERR11488694 MDR-TB lineage4.9.1 None
ERR212076 Sensitive lineage4.9.1 mw
SRR26331631 RR-TB lineage4.9.1 None
ERR11466005 Sensitive lineage4.9.1 None
SRR5341345 Sensitive lineage4.9 None
ERR11466263 RR-TB lineage4.9.1 None
ERR176625 Sensitive lineage4.9.1 mw
SRR6789636 Sensitive lineage4.9.1 None
ERR7801262 Sensitive lineage4.9.1 None
ERR190381 Sensitive lineage4.9.1 mw
SRR10869321 Sensitive lineage4.9.1 None
SRR2101414 Sensitive lineage4.9.1 None
ERR9993001 Other lineage4.9.1 None
ERR2660471 Sensitive lineage4.9.1 None
ERR11465409 Sensitive lineage4.9.1 None
ERR245712 Sensitive lineage4.9.1 mw
ERR126611 Sensitive lineage4.9.1 None
SRR6855838 Sensitive lineage4.9.1 None
ERR176824 Sensitive lineage4.9.1 mw
ERR9993153 Other lineage4.9.1 None
ERR9119108 Sensitive lineage4.9.1 None
ERR11466054 Sensitive lineage4.9.1 None
SRR6982291 Sensitive lineage4.9.1 None
ERR2515166 MDR-TB lineage4.9.1 za
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR176751 HR-TB lineage4.9 None
SRR6982416 Sensitive lineage4.9.1 None
SRR2101609 Sensitive lineage4.9.1 None
SRR10869055 Sensitive lineage4.9.1 None
ERR8975672 RR-TB lineage4.9.1 None
SRR5341437 Sensitive lineage4.9 None
ERR4798204 RR-TB lineage4.9.1 in
SRR16156264 Sensitive lineage4.9.1 None
SRR3675514 Sensitive lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR221527 Sensitive lineage4.9.1 mw
SRR6044819 Sensitive lineage4.9 None
SRR6789618 Sensitive lineage4.9.1 None
ERR779669 Sensitive lineage4.9.1 None
SRR6896559 Sensitive lineage4.9.1 None
ERR037504 Other lineage4.9.1 None
ERR164007 Sensitive lineage4.9.1 mw
ERR11465663 Sensitive lineage4.9.1 None
ERR11465335 RR-TB lineage4.4.1.1;lineage4.9.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR1023451 Sensitive lineage4.9.1 None
ERR176636 Sensitive lineage4.9.1 mw
SRR6982527 Sensitive lineage4.9.1 None
ERR176808 Sensitive lineage4.9.1 mw
ERR161037 HR-TB lineage4.9 None
SRR2101553 Sensitive lineage4.9.1 None
ERR245659 Sensitive lineage4.9.1 mw
SRR21732620 Sensitive lineage4.9.1 None
ERR11252656 Sensitive lineage4.9.1 None
ERR11775076 RR-TB lineage4.9.1 None
ERR11252514 Sensitive lineage4.9.1 None
ERR176585 Sensitive lineage4.9.1 mw
ERR037507 Sensitive lineage4.9.1 mw
ERR11488593 MDR-TB lineage4.9.1 None
ERR228190 Sensitive lineage4.9.1 None
ERR11488506 MDR-TB lineage4.9.1 None
ERR11465065 Sensitive lineage4.9.1 None
SRR9971114 Other lineage2.2.1 None
ERR190380 Sensitive lineage4.9.1 mw
ERR4809160 Sensitive lineage4.9.1 za
SRR2101449 Sensitive lineage4.9.1 None
ERR11466230 Sensitive lineage4.9.1 None
ERR11466006 Sensitive lineage4.9.1 None
ERR11466505 Sensitive lineage4.4.1.1;lineage4.9.1 None
ERR10112871 RR-TB lineage4.9.1 None
SRR6982040 Sensitive lineage4.9.1 None
ERR161171 Sensitive lineage4.9.1 mw
ERR400320 Sensitive lineage4.9 None
ERR8975544 Sensitive lineage4.9.1 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR245758 Other lineage4.9.1 None
ERR4822041 Sensitive lineage4.9.1 gb
ERR1034946 Sensitive lineage4.9.1 za
ERR4816466 HR-TB lineage4.9 None
ERR11466061 Sensitive lineage4.9.1 None
SRR3675473 Sensitive lineage4.9 None
ERR11488656 Pre-XDR-TB lineage4.9.1 None
ERR2512770 Sensitive lineage4.2.1 None
ERR7737795 MDR-TB lineage4.9.1 None
ERR7801295 Sensitive lineage4.9.1 None
ERR11488432 MDR-TB lineage4.9.1 None
ERR2516030 Sensitive lineage4.9.1 za
SRR6789627 Sensitive lineage4.9.1 None
SRR3675577 Sensitive lineage4.9 None
ERR245658 Sensitive lineage4.9.1 mw
ERR11466164 Sensitive lineage4.1.1.3;lineage4.9.1 None
ERR245653 Sensitive lineage4.9.1 mw
ERR176761 Sensitive lineage4.9.1 mw
ERR9121768 Sensitive lineage4.9.1 None
SRR3675548 Sensitive lineage4.9 None
SRR15722998 Pre-XDR-TB lineage4.2.2 None
ERR11466079 Sensitive lineage4.9.1 None
SRR3675580 Sensitive lineage4.9 None
ERR1063842 HR-TB lineage4.9.1 None
SRR6789632 Sensitive lineage4.9.1 None
ERR245772 Sensitive lineage4.9.1 None
SRR6896589 Sensitive lineage4.9.1 None
ERR11466038 Sensitive lineage4.9.1 None
SRR5341323 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR181901 Sensitive lineage4.9.1 mw
ERR245847 Sensitive lineage4.9.1 mw
SRR12708384 Sensitive lineage4.9 None
SRR6789633 Sensitive lineage4.9.1 None
ERR2515120 Sensitive lineage4.9.1 za
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR4809133 Sensitive lineage4.9.1 za
SRR6896332 Sensitive lineage4.9.1 None
SRR27450232 Sensitive lineage4.9.1 None
ERR176804 Sensitive lineage4.9.1 mw
ERR11466092 Sensitive lineage4.9.1 None
ERR1023437 Sensitive lineage4.9.1 None
ERR221547 Sensitive lineage4.9.1 mw
ERR2513363 Sensitive lineage4.9.1 gb
ERR11488739 MDR-TB lineage4.9.1 None
ERR216974 Sensitive lineage4.9.1 None
ERR11488481 MDR-TB lineage4.9.1 None
SRR16156244 Sensitive lineage4.9.1 None
SRR3675247 Other lineage4.9 None
ERR176594 Sensitive lineage4.9.1 mw
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR245835 Sensitive lineage4.9.1 mw
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR7821203 Other lineage4.9.1 None
ERR11466459 Sensitive lineage4.9.1 None
ERR2517475 Other lineage4 None
SRR27450045 Sensitive lineage4.9.1 None
ERR190340 Sensitive lineage3.1;lineage4.9.1 None
ERR161052 Sensitive lineage4.9.1 mw
ERR2513283 Sensitive lineage5.1.4 None
ERR11466262 Sensitive lineage4.9.1 None
ERR11252688 Sensitive lineage4.9.1 None
ERR11252446 Sensitive lineage4.9.1 None
SRR12708416 Sensitive None
ERR245845 Sensitive lineage4.9.1 mw
ERR245719 Sensitive lineage4.9.1 mw
ERR8975658 RR-TB lineage4.9.1 None
ERR126635 Sensitive lineage4.9.1 mw
ERR176811 Sensitive lineage4.9.1 None
ERR1750894 Sensitive lineage4.9.1 zw
ERR11465410 Sensitive lineage4.9.1 None
ERR11466504 Sensitive lineage4.4.1.1;lineage4.9.1 None
ERR245650 Sensitive lineage4.9.1 mw
SRR1175496 Sensitive lineage4.9 None
ERR176608 Other lineage4.9.1 mw
ERR11466117 Sensitive lineage4.9.1 None
ERR3275450 Other lineage4 None
ERR4821577 Sensitive lineage4.9.1 gb
ERR037526 Sensitive lineage4.9.1 mw
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6153116 Other lineage4.9.1 ca
ERR11465662 Sensitive lineage4.9.1 None
ERR11466012 Sensitive lineage4.9.1 None
SRR3675455 Sensitive lineage4.9 None
ERR11466338 Sensitive lineage4.9.1 None
ERR1750893 Sensitive lineage4.9.1 zw
SRR6046245 Other lineage4.9 None
ERR11465042 Sensitive lineage4.9.1 None
ERR176733 Sensitive lineage4.9.1 mw