Rv0006 - c.558A>C


Drug resistance types
152 Sensitive 8 RR-TB 140 HR-TB 15 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 76 Other
lineage Counts
lineage Count
lineage2.2 3
124
lineage4.5 1
lineage4.1.2.1 14
lineage4 113
lineage4.3.4 2
lineage1.1.3.1 1
lineage4.3.2 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2 2
lineage2.2.1 17
lineage4.6.1.1 1
lineage2.2.2 1
lineage4.9 68
lineage4.4.1.1 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2.2.1.1 1
La1.8.1 2
lineage4.2.1 3
lineage4.1 3
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3;lineage2.1 1
lineage2.1 3
lineage1.2.1.1 1
lineage3.1.2.2 1
lineage4.1.1.3 2
lineage4;lineage1.1.2 1
lineage3 6
lineage3.1.3 1
lineage4.1.1.2 1
lineage4.3.4.2.1 2
lineage4.6.2.2 1
lineage1.1.2 1
lineage4.9;lineage2.1 1
lineage3.1 2
lineage1.1 1
lineage4.2.1.1 1
lineage4.3.4.1 1
La2 1
lineage4.1.2 2
lineage4.8 1
lineage4.7 1
lineage4.3.2.1 1
lineage4.3.4.1;La1.7 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 397
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4810624 HR-TB lineage2.2 None
ERR4812155 Sensitive None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR6358991 HR-TB None
ERR5917710 Other lineage4.1.2.1 None
ERR6358979 Other None
ERR6358837 HR-TB None
ERR6866639 Other None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866022 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR6866807 HR-TB lineage4 None
ERR736834 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736848 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736872 Sensitive lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR751326 Sensitive lineage4 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR8976043 HR-TB None
ERR9119669 HR-TB None
ERR9634265 Sensitive None
ERR987722 HR-TB None
SRR1162740 Other lineage4.1.2.1 None
SRR069989 HR-TB lineage2 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
ERR987733 RR-TB lineage4.6.1.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR10315567 Other lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1174897 HR-TB None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1172310 HR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1173777 Other lineage4 None
SRR1172146 Sensitive lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173568 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175512 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1180250 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1184021 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR13861304 Other lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861224 Sensitive lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR13861663 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR16157123 Other lineage4.9 None
SRR1640750 HR-TB None
SRR12708416 Sensitive lineage4.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR8692790 RR-TB lineage4 None
SRR8692887 Other None
SRR3675473 Sensitive lineage4.9 None
SRR3675482 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675502 Other None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR158583 HR-TB None
ERR161033 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675210 Sensitive lineage4.9 None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675209 Sensitive lineage4.9 None
SRR3675501 HR-TB None
SRR3675229 Other lineage4 None
SRR3675222 Other None
ERR702405 Sensitive lineage2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675247 Other lineage4.9 None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675279 Other None
SRR3675265 Other lineage4 None
ERR176643 HR-TB None
SRR3675284 HR-TB lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675312 HR-TB lineage4 None
SRR3675514 Sensitive lineage4.9 None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
SRR3675456 HR-TB None
ERR176751 HR-TB None
SRR3675510 Other None
ERR176740 HR-TB None
SRR3675455 Sensitive lineage4 None
SRR3675522 Other None
SRR3675527 RR-TB lineage4.9 None
ERR4816050 HR-TB lineage3.1.2.2 None
SRR3675541 Sensitive lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
SRR3675550 Other None
SRR3675545 HR-TB None
SRR3675558 HR-TB None
SRR3675555 HR-TB None
ERR212123 Other None
SRR3675577 Sensitive lineage4.9 None
ERR212121 HR-TB None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR212138 HR-TB lineage4 None
ERR1034791 RR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR5341384 Sensitive lineage4.9 None
ERR4816656 HR-TB None
ERR1035162 Other None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817998 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR4819051 Other lineage4 None
ERR4818252 Other lineage4.1.1.2 None
ERR2512770 Other lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818929 HR-TB None
SRR5341396 Other lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341387 Other lineage4 None
SRR5341453 Sensitive None
SRR5341418 Other None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341400 HR-TB lineage4 None
SRR5341425 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341437 Sensitive lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR5341298 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341293 HR-TB lineage4 None
SRR5341300 Other lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341299 Sensitive lineage4 None
SRR5341315 Sensitive None
SRR5341308 Sensitive lineage4 None
SRR5341313 HR-TB None
SRR5341303 RR-TB lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR5341461 Sensitive lineage4 None
SRR5341323 Sensitive lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341467 Other lineage4 None
SRR5341366 Sensitive lineage4 None
ERR4821053 Other lineage3 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
SRR5341469 Other lineage4 None
SRR5341470 HR-TB None
SRR6045503 HR-TB None
ERR2693239 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045519 HR-TB None
ERR278594 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045952 HR-TB None
SRR6045010 Other lineage4 None
SRR6325444 HR-TB None
SRR6045158 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046259 Sensitive lineage4.9 None
SRR6046514 HR-TB None
SRR6046362 HR-TB None
ERR2517528 Other lineage3 nl
ERR4830353 Other None
SRR6046482 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
SRR6046802 Other lineage4 None
SRR6046824 HR-TB None
ERR323034 HR-TB lineage3.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
SRR6046897 Sensitive lineage4 None
SRR6511621 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831743 HR-TB lineage4.1.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR294248 HR-TB None
ERR4831638 Sensitive None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6832249 Other lineage2.2.1 None
SRR6982246 Sensitive lineage4 None
SRR6789624 MDR-TB lineage4.1 None
ERR323036 HR-TB None
ERR11465801 Other lineage4.3.4.1 None
ERR502889 Other None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR5311099 HR-TB None
SRR8217918 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
ERR5311081 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
ERR323066 Sensitive lineage4 None
SRR7645928 RR-TB lineage4.7 None
ERR323039 HR-TB None
ERR323055 HR-TB None
ERR323053 HR-TB None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR067681 HR-TB None
ERR323085 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR11466044 Other lineage4.1.1.3 None
ERR1063858 HR-TB None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063883 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR1063896 Sensitive None
ERR108471 HR-TB lineage4 None
ERR133986 HR-TB None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR133825 Sensitive lineage4 None
ERR3283028 Other None
ERR3283017 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 HR-TB None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283040 HR-TB None
ERR3445501 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR349265 Sensitive lineage4 None
ERR3445502 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR3468544 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797016 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797064 Sensitive None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR400326 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4769474 HR-TB lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4798431 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4797474 Other None
ERR4798099 Other None
ERR4799547 Sensitive lineage2.2.1 None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798406 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None