Rv1644 - c.-216G>C


Drug resistance types
55 Sensitive 5 RR-TB 70 HR-TB 15 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
La1.7;lineage4.9 5
4
lineage4.9 99
lineage4.6.2.2 1
lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage4.5 1
lineage2.2 4
lineage2.2.1;lineage4 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage4 4
lineage3 2
lineage2.2.1 7
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 2
lineage4.9;lineage9 3
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.9 8
lineage3.1.2.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.3.2.1 1
La1.7.1;lineage4.9 1
La1;lineage4.9 3
lineage2.2.1;lineage4.1.2.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
lineage2.2.1.1 3
lineage1.1.1;lineage4 1
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage4.8;lineage4.9 2
lineage5.2 2
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage4 1
La2;lineage4.9 1
M.canetti;lineage4.9 1
lineage1;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
lineage4.1.2.1 2
La2;lineage4.9;lineage9 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 2
La1.6;lineage4 1
lineage2.2.1.2;lineage7 1
lineage4.3.4 1
lineage4.8 1
lineage2.1;lineage4.9 1
La3;lineage4.3.4 1
lineage1.1.3.1 1
lineage1.1.2 1
lineage4.9.1 1
lineage4.3.4.1 2
lineage1.1.3.2 1
spoligotype Counts
spoligotype Count
None 207
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176560 HR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
SRR10808730 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6045053 Other lineage4 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR9896144 Other lineage3 None
ERR6866410 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797043 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR12708416 Sensitive None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR28351339 MDR-TB lineage4 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29096717 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4796577 HR-TB None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR26399239 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283028 Other La3;lineage4 None
ERR1063896 Sensitive None
SRR3675522 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29096276 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR108471 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR29096203 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR137286 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675270 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR12142339 HR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816478 HR-TB lineage4 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR473332 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR28868888 Other lineage1.1.3.2 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4769452 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4797264 Sensitive lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None