Rv3596c - c.1923G>T


Drug resistance types
49 Sensitive 2 RR-TB 33 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 37 Other
lineage Counts
lineage Count
lineage1.1.1;lineage4 1
lineage2.2.1 6
lineage4.9 73
lineage4.6.3;lineage4.9 1
2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 2
lineage2.2.1.2;lineage7 1
lineage4.3.4 1
lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage4.5 3
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 2
La2;lineage4.9;lineage9 1
M.canetti;lineage4.9 2
lineage1.1.1 1
lineage4.2.1 1
lineage4 2
lineage4.1.2.1 1
lineage4.1;lineage4.9 1
lineage3 5
La1.7.1;lineage4.9 1
La1.8.1 1
lineage4.9;lineage7 1
lineage5.1.4 1
lineage4.2;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
lineage1.2.1.2 1
lineage1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.1;lineage4.9;lineage6 1
La2;lineage4.9 1
lineage4.9;lineage9 2
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR349264 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR6045010 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR369162 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR12708409 HR-TB lineage4.3.3 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675548 Sensitive lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR363474 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR3675387 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR181824 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR29096410 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR349300 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR7236330 Other La1.8.1 None
ERR176751 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR12708416 Sensitive None
ERR2513283 Sensitive lineage5.1.4 None
SRR20632814 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180226 HR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR752229 Other lineage4.5 None
SRR29097026 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR9787014 Other lineage6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR369158 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR3675265 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR2513259 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
SRR3675455 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1175508 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR3799304 Other lineage6.1.1 None