Rv3596c - c.1923G>T
Drug resistance types
57 Sensitive
2 RR-TB
46 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4 | 36 |
| lineage4.1 | 1 |
| lineage4.9 | 34 |
| lineage4.9;lineage4.6.3 | 1 |
| 39 | |
| lineage3 | 5 |
| lineage4.1.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.5 | 3 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage3.1.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR176779 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815296 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4819051 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR2514142 | HR-TB | lineage1.2.2.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR6045503 | HR-TB | None | SRR5341470 | HR-TB | None | SRR5533143 | MDR-TB | lineage2.2.1.1 | None | SRR6045519 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046492 | Other | None | SRR6045033 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR294266 | HR-TB | None | ERR4831638 | Sensitive | None | ERR323053 | HR-TB | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4769419 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR4812155 | Sensitive | None | ERR752229 | Other | lineage4.5 | None | ERR987722 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None |
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