Rv3596c - c.1923G>T


Drug resistance types
49 Sensitive 2 RR-TB 33 HR-TB 8 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 37 Other
lineage Counts
lineage Count
lineage2.2.1 6
lineage4.9 73
lineage4.5 3
lineage4.2;lineage4.8.1;lineage4.9 2
La1.8.1 1
lineage6.1.1 2
2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
lineage4.1.1.3;lineage4.9 2
lineage2.2.1.2;lineage7 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 1
lineage4 2
lineage3 5
lineage4.9;lineage9 2
lineage4.1;lineage4.9 1
lineage3.1.2.2 1
La1.7.1;lineage4.9 1
lineage4.9;lineage6.3 2
La2;lineage4.9;lineage9 1
M.canetti;lineage4.9 2
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage1;lineage4.9 1
lineage4.9;lineage6.1.3 1
La2;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage7 1
lineage1.1.1 1
lineage4.2;lineage4.9 1
lineage4.2.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
lineage2.2.1;lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR3675441 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR4818110 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR987722 MDR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4811030 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR9787014 Other lineage6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1175496 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR3275709 HR-TB lineage3 nl
ERR349300 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR349299 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR363502 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR12708416 Sensitive None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR2513283 Sensitive lineage5.1.4 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675580 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175508 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR349266 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR20632814 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180226 HR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR29096410 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR176651 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR369158 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2513259 Other lineage3 None
SRR3675455 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR400345 Other lineage4.9 None