ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR6832249
|
Sensitive
|
lineage2.2.1
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR2693257
|
Other
|
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2693231
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.9
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR3675234
|
Other
|
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1640750
|
Other
|
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29096410
|
Other
|
lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR26159047
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR28351339
|
MDR-TB
|
lineage4
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR3675502
|
Sensitive
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR17832802
|
HR-TB
|
lineage3
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4798504
|
RR-TB
|
lineage3
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR3283020
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|