Rv3596c - c.108C>T


Drug resistance types
83 Sensitive 4 RR-TB 111 HR-TB 13 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
lineage4 60
lineage2.2.1 15
138
lineage4.5 2
lineage4.9 43
lineage1.1.3.1 1
lineage4.1.3 2
lineage6.3.1 1
lineage4.1.2.1 3
lineage6.1.1 2
lineage4.6.2.2 1
lineage2.2.1.1 4
lineage3 4
La1.8.1 1
lineage1.1.2 1
lineage2.2 1
lineage2 1
lineage4.1 3
lineage4.9;La3 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage4.9;lineage2.1 1
lineage6.3;lineage2.2.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 1
lineage4.1.1 1
lineage4.1.1.2 1
lineage5.1.4 1
lineage4.9;lineage2.1 1
lineage4.2.1 1
La2 1
lineage4.1.2 2
lineage4.7 1
lineage4.8 1
lineage4.3.2.1 1
lineage4.4.2 1
La1.2 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 303
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799378 Sensitive lineage4 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811022 HR-TB None
ERR4810741 HR-TB None
ERR4811030 Sensitive None
ERR4811031 Sensitive lineage4.5 None
ERR6358979 Other None
ERR4811142 MDR-TB None
ERR4811105 HR-TB None
ERR4812155 Sensitive None
ERR5336148 Other None
ERR6358837 HR-TB None
ERR6358951 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6866639 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866022 Other None
ERR736865 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR9786604 Other None
ERR751326 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 HR-TB None
ERR8976043 HR-TB None
ERR9634265 Sensitive None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR10808399 Sensitive lineage4 None
ERR987722 HR-TB None
SRR10315567 Other lineage2.2.1 None
SRR1175496 HR-TB lineage4.9 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1172310 HR-TB None
SRR10808668 Sensitive lineage2.2.1 None
SRR1173568 Other lineage4.9 None
SRR1174897 HR-TB None
SRR1175507 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1175508 Other lineage4.9 None
SRR12416824 HR-TB None
SRR1183965 Sensitive lineage4.9 None
SRR12142341 HR-TB None
SRR1181091 Other lineage2.2.1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR13861439 RR-TB lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR14801749 Sensitive None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR1640750 HR-TB None
SRR15368973 Other None
SRR17832802 HR-TB lineage3 None
SRR1791747 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR20632814 Sensitive lineage4 None
SRR25827682 Other None
SRR20970043 MDR-TB lineage2.2.1 None
SRR26159043 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR26399973 Other lineage4.9;La3 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR3675473 Sensitive lineage4.9 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675455 Sensitive lineage4 None
SRR3675472 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675477 Other lineage4.9 None
SRR3675465 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675482 HR-TB None
ERR158583 HR-TB None
SRR3675209 Sensitive lineage4.9 None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
SRR3675222 Other None
SRR3675210 Sensitive lineage4.9 None
SRR3675221 HR-TB None
SRR3675229 Other lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675234 Other None
SRR3675246 Sensitive lineage4 None
SRR3675236 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675270 HR-TB None
SRR3675266 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675283 Sensitive lineage4.9 None
SRR3675279 Other None
SRR3675292 Sensitive lineage4 None
SRR3675312 HR-TB lineage4 None
SRR3675311 Other None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
SRR3675501 HR-TB None
SRR3675514 Sensitive lineage4.9 None
SRR3675502 Other None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR3675547 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675545 HR-TB None
ERR212001 HR-TB None
ERR212034 HR-TB None
SRR3675550 Other None
SRR3675558 HR-TB None
SRR3675577 Sensitive lineage4.9 None
SRR3675571 HR-TB None
SRR3675574 HR-TB None
ERR4816470 Other lineage3 None
ERR4816466 HR-TB None
ERR4816656 HR-TB None
SRR4033900 HR-TB lineage2.2.1 None
SRR5341425 Other lineage4 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818929 HR-TB None
ERR2513283 Other lineage5.1.4 None
SRR5341396 Other lineage4 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818536 Other lineage4.9 None
SRR5341366 Sensitive lineage4 None
SRR5341387 Other lineage4 None
SRR5341418 Other None
ERR4819462 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341323 Sensitive lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341469 Other lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693231 Other None
SRR5341470 HR-TB None
SRR6045526 HR-TB None
ERR2693239 HR-TB None
ERR2693230 Other None
SRR6045503 HR-TB None
ERR2693257 Other None
ERR2693254 Other None
SRR6045519 HR-TB None
SRR5535933 HR-TB None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2660539 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045555 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6044790 HR-TB None
SRR6044890 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6045892 Sensitive None
SRR6044876 Sensitive lineage4 None
SRR6046046 Other None
SRR6045053 Other None
SRR6046210 Other lineage4 None
SRR6046245 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046611 HR-TB lineage4.9 None
SRR6046305 Other lineage4.9 None
ERR278594 HR-TB None
SRR6325444 HR-TB None
SRR6046460 HR-TB None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6325448 HR-TB None
SRR6325442 HR-TB None
SRR6046362 HR-TB None
SRR6046514 HR-TB None
SRR6325447 HR-TB None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6046802 Other lineage4 None
SRR6046824 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046878 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR323036 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR294248 HR-TB None
SRR6832249 Other lineage2.2.1 None
SRR6789626 Other None
SRR6789624 MDR-TB lineage4.1 None
ERR502889 Other None
ERR294266 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502524 HR-TB La2 None
ERR5311090 HR-TB None
ERR502943 HR-TB None
SRR7496509 Other None
ERR5311081 HR-TB None
ERR5311099 HR-TB None
SRR7496517 Other None
SRR9970980 Other lineage4.1.2 None
SRR7496523 Other lineage4.7 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971112 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323039 HR-TB None
ERR323107 Other lineage4 None
ERR323053 HR-TB None
ERR323063 HR-TB None
ERR1035122 Sensitive None
ERR323066 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR067699 HR-TB lineage4 None
ERR1034652 Other None
ERR323085 Sensitive lineage4 None
ERR067681 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283024 Other None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR137286 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR363456 Sensitive lineage4 None
ERR3439432 Other None
ERR3283036 HR-TB None
ERR3468544 HR-TB None
ERR373945 HR-TB lineage4 None
ERR363509 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR3797044 Other None
ERR3797036 HR-TB None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR400336 Sensitive lineage4 None
ERR3797082 Other lineage4.9 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR3797061 Other None
ERR3797069 Other None
ERR3799304 Other lineage6.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4024991 Other None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR4769442 HR-TB lineage4 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4188350 HR-TB None
ERR4769444 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4798431 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4797474 Other None
ERR4798099 Other None
ERR4798406 HR-TB None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None