Rv3793 - c.879C>T
Drug resistance types
40 Sensitive
4 RR-TB
1 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 4 |
| lineage2.2.1 | 6 |
| lineage4.9 | 43 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
| 1 | |
| M.canetti;lineage4.2 | 1 |
| lineage4.5 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR1180147 | Other | lineage2.2.1.1 | None |
| SRR1183144 | Other | lineage2.2.1 | None |
| ERR349296 | Sensitive | lineage4.9 | None |
| ERR363456 | Sensitive | lineage4.9 | None |
| ERR349264 | Sensitive | lineage4.9 | None |
| ERR369156 | Sensitive | lineage4.9 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR363446 | Sensitive | lineage4.9 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| SRR3675477 | Sensitive | lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
| ERR363453 | Sensitive | lineage4.9 | None |
| ERR369163 | Sensitive | lineage4.9 | None |
| SRR3675522 | Other | lineage4.9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR6046046 | Other | lineage4.9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR363506 | Sensitive | lineage4.9 | None |
| SRR6832178 | HR-TB | lineage4.2.1.1 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR3675279 | Sensitive | lineage4.9 | None |
| ERR349300 | Sensitive | lineage4.9 | None |
| ERR363421 | Sensitive | lineage4.9 | None |
| ERR373945 | Sensitive | lineage4.9 | None |
| ERR363437 | Sensitive | lineage4.9 | None |
| ERR400345 | Other | lineage4.9 | None |
| ERR349298 | Sensitive | lineage4.9 | None |
| SRR1181091 | Other | lineage2.2.1.1 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6045706 | Sensitive | lineage4.9 | None |
| SRR6832249 | Sensitive | lineage2.2.1 | None |
| SRR12708416 | Sensitive | None | |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR1183106 | RR-TB | lineage2.2.1.1 | None |
| SRR1183145 | Other | lineage2.2.1 | None |
| SRR2010299 | MDR-TB | lineage2.2.1 | None |
| ERR369159 | Sensitive | lineage4.9 | None |
| SRR6045503 | Sensitive | lineage4.9 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR363498 | Sensitive | lineage4.9 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| ERR363426 | Sensitive | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR400326 | Other | lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR363509 | Sensitive | lineage4.9 | None |
| SRR3675229 | Sensitive | lineage4.9 | None |
| ERR363445 | Other | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR363502 | Other | lineage4.9 | None |
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| ERR363447 | Other | lineage4.9 | None |
| ERR349266 | Sensitive | lineage4.9 | None |
| ERR369157 | Sensitive | lineage4.9 | None |
| ERR373946 | Sensitive | lineage4.9 | None |
| SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
| SRR27107237 | Sensitive | lineage4.3.3 | None |
| ERR4811030 | Sensitive | lineage4.9 | None |
| ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR369158 | Other | lineage4.9 | None |
| SRR6045053 | Other | lineage4 | None |
| ERR363479 | Sensitive | lineage4.9 | None |
| ERR369161 | Sensitive | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| SRR1175508 | Sensitive | lineage4.9 | None |
| SRR6046245 | Other | lineage4.9 | None |
| SRR3675387 | Other | lineage4.9 | None |
| SRR1180172 | Other | lineage2.2.1 | None |
| SRR28119827 | Other | La3;lineage4.9 | None |
| ERR373947 | Other | lineage4.9 | None |
| SRR1184024 | RR-TB | lineage2.2.1.1 | None |
