lineage | Count |
---|---|
lineage4.9 | 16 |
lineage4 | 10 |
lineage2.2.1 | 2 |
lineage4.1 | 4 |
23 | |
lineage1.2.2.2 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1204000 | Sensitive | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675229 | Other | lineage4 | None | ERR552160 | Sensitive | lineage4.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR552159 | Sensitive | lineage4.1 | None | SRR3675502 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675279 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | SRR5341396 | Other | lineage4 | None | SRR3675550 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | SRR5341345 | Sensitive | lineage4.9 | None | SAMEA2534452 | Sensitive | lineage4.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4822092 | Sensitive | lineage1.2.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | ERR502889 | Other | None | ERR4831638 | Sensitive | None | ERR4829467 | Sensitive | lineage1.2.2.2 | it | ERR4818251 | Sensitive | lineage1.2.2.2 | gb | ERR502943 | HR-TB | None | SRR8217918 | HR-TB | None | ERR133986 | HR-TB | None | ERR067681 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR6336803 | Other | lineage1.2.1.2.1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4798406 | HR-TB | None | ERR4812155 | Sensitive | None | ERR9896103 | Sensitive | lineage4.1.2.1 | None |
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