EBG00000313339 - n.259C>A


Drug resistance types
91 Sensitive 14 RR-TB 74 HR-TB 23 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 110 Other
lineage Counts
lineage Count
lineage4.9 188
lineage2.2.1 30
lineage4.8 12
La1;lineage2;lineage4.9 1
lineage3 4
lineage1.2.1.2.1 1
lineage4.7 1
lineage4.1.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.4.1.1 1
lineage4.1.2.1 6
M.canetti;lineage4.9 1
lineage2.2.1.1 4
La1;lineage4.9 2
lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 2
lineage4.2;lineage4.9 2
lineage4.1;lineage4.9 2
lineage2;lineage4 1
lineage4.3.4.1 2
lineage3;lineage4.9 1
La1.2.BCG 1
2
lineage4.1.1.3;lineage4.9 2
lineage2.2.1;lineage4 2
lineage4 4
lineage1.1.2 2
lineage4.5 3
La3;lineage4.9 4
lineage4.2.1 3
lineage4.3.2.1 2
M.canetti;lineage4.2;lineage4.9 1
lineage2;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2 2
lineage1.1.3.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.4.1.1.1 2
lineage4.1.2 1
lineage4.3.3;lineage4.8 2
La1.7;lineage4.9;lineage7 1
lineage4.8.1 1
lineage6.1.3 2
lineage4.9;lineage6.1.3 1
lineage3;lineage4 1
lineage4.3.3 2
lineage4.3.1;lineage4.9;lineage6 1
La1;lineage4.1.2 1
La1.3 1
lineage4.4.1.2 1
lineage1.1.1;lineage4 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 316
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675210 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4816762 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR22250223 HR-TB lineage1.2.1.2.1 None
ERR4769457 Other lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR926160 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR7645906 Other lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
SRR7645899 Other lineage2.2.1 None
SRR6045371 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR2229366 Other lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR1173421 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1180172 RR-TB lineage2.2.1 None
SRR5341396 Other lineage3;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
SRR3675209 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755657 Other lineage4.8 None
ERR867566 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR7645971 Other lineage2.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR5535933 Other lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR2229811 Other lineage4.8 dk
ERR363474 Sensitive lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4798823 HR-TB lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR7496471 Sensitive lineage4 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR2229541 Other lineage4.8 None
SRR10808399 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR1173281 Other lineage3 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR363453 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1180399 Sensitive lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045503 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR349300 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR363449 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR4799025 Other lineage4.8 None
ERR323115 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400326 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1180355 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172885 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341296 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR21713567 Other lineage4.5 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797046 HR-TB lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1238558 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR363446 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1173568 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR373945 Other lineage4.9 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR20632814 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR369157 Sensitive lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR363499 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR369151 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR2229436 Other lineage4.8 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR926156 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR10869071 MDR-TB lineage2.2.1 None