Rv0005 - c.1887G>C
Drug resistance types
44 Sensitive
3 RR-TB
2 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 60 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1 | 4 |
| 2 | |
| lineage4.3.3 | 7 |
| lineage4.1.2.1;lineage4.3.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 3 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363449 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR363479 | Other | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | SRR7535086 | Other | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR18910993 | Other | lineage4.3.3 | None | ERR4830680 | Sensitive | lineage4.1.2.1;lineage4.3.3 | dz | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR3275301 | Sensitive | lineage4.3.3 | nl | ERR369157 | Sensitive | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR4830740 | Sensitive | lineage4.3.3 | dz | SRR11662694 | Other | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363447 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR2446314 | Sensitive | lineage4.3.3 | nl | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR552574 | Other | lineage4.3.3 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6045371 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR2517559 | RR-TB | lineage4.3.3 | nl | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None |
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