EBG00000313339 - n.1060A>G
Drug resistance types
93 Sensitive
12 RR-TB
20 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| 13 | |
| lineage2.2.1 | 5 |
| lineage3 | 4 |
| lineage4.9 | 41 |
| lineage4.4.2 | 2 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1 | 1 |
| La1.7.1 | 1 |
| lineage4.7 | 2 |
| lineage4 | 51 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.6 | 1 |
| lineage4.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage6 | 1 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 5 |
| La1.8.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173310 | MDR-TB | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175473 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR13837432 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18213794 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21727578 | Sensitive | lineage4.3.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR1815538 | Other | La1.7.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2027208 | Sensitive | lineage4.6.2.2 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4817069 | RR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4817822 | Other | lineage4.6 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4818929 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4820801 | Other | lineage1.2.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821057 | HR-TB | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2707110 | Sensitive | lineage4.7 | cd | SRR6045217 | Other | lineage4 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6789628 | HR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6896545 | Other | lineage4.9 | None | ERR10796569 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR8902558 | Other | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283032 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4627376 | Other | La1.8.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786472 | Sensitive | lineage4.4.1.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR11349178 | MDR-TB | lineage4.4.1.1.1 | None |
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