Rv0006 - c.438C>T
Drug resistance types
8 Sensitive
0 RR-TB
3 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 9 |
| 4 | |
| lineage2.1 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.4.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.3 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400345 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR7535086 | Other | None | ERR702406 | Other | lineage2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR29096424 | Sensitive | lineage4.8 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR2024949 | Pre-XDR-TB | lineage4.4.2 | cn | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR12118002 | MDR-TB | lineage4.3.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR13264981 | Sensitive | La1.7;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3675441 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR2024903 | MDR-TB | lineage4.4.2 | cn | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786604 | Other | None | SRR29096795 | Sensitive | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR2503440 | Sensitive | lineage4.1.2.1 | fi | SRR26159035 | Sensitive | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None |
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