Rv0006 - c.1779G>C
Drug resistance types
71 Sensitive
1 RR-TB
76 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| 78 | |
| lineage4.9 | 27 |
| lineage4 | 60 |
| lineage2.2 | 7 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.9.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2.1 | 7 |
| lineage2.2.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769452 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR245758 | Other | lineage4.9.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR9786843 | Other | None | ERR9119669 | HR-TB | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675222 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675550 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR4818929 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR5341396 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5535933 | HR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR6045503 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830353 | Other | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502889 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None |
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