Rv0006 - c.1779G>C


Drug resistance types
33 Sensitive 5 RR-TB 28 HR-TB 15 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 50 Other
lineage Counts
lineage Count
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
La3;lineage4.9 7
M.canetti;lineage1 1
lineage4.9;lineage9 1
lineage4.1.2.1 2
lineage4.9 45
M.canetti;lineage4.9 2
La1.7;lineage4.9 3
M.canetti;lineage4.2 1
lineage2.2.1.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage7 4
lineage4.6.4;lineage4.9 1
lineage2.2.1 6
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 2
lineage4.6.1.1 2
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage3 1
lineage2.1;lineage4.9 2
lineage4.3.2.1 1
lineage1;lineage4.9 2
La1.2;La1.8.1 1
lineage4 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.7.1;lineage4.9 1
lineage6.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
1
lineage4.1;lineage4.9 1
lineage4.5 1
lineage2.2 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
lineage2.2.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage1.1.1;lineage4 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1.2;lineage7 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.9.1 1
La1.7 1
spoligotype Counts
spoligotype Count
None 131
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341456 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR13285192 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR363453 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR28044694 Sensitive lineage3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675455 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR373947 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
ERR9786843 Other None
SRR10808730 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR20969731 Other lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR373945 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR3675582 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6046564 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR29231479 RR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR26399239 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR369158 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
ERR4830353 Other La1.7 None
SRR5341330 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None