Rv3596c - c.396C>T
Drug resistance types
30 Sensitive
1 RR-TB
16 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 1 |
| lineage4.9 | 24 |
| lineage5.1.4 | 1 |
| lineage4 | 11 |
| lineage4.1.2.1 | 1 |
| lineage3 | 2 |
| 17 | |
| lineage6.1.1 | 2 |
| La2 | 1 |
| lineage2.2.1 | 5 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2512770 | Other | lineage4.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341396 | Other | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR323053 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | None | ERR4812155 | Sensitive | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1174897 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1002680 | MDR-TB | lineage2.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None |
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