lineage | Count |
---|---|
lineage4.1 | 2 |
lineage4 | 59 |
lineage4.9 | 14 |
38 | |
lineage4.2.1 | 1 |
lineage2.2 | 4 |
lineage4.1.2.1 | 2 |
La1.2 | 1 |
lineage2.2.1 | 2 |
lineage4.5 | 2 |
lineage2.2.1.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 127 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | SRR3675387 | Sensitive | None | SRR5341330 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341456 | Other | None | ERR1035138 | MDR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045053 | Other | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR502943 | HR-TB | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831117 | HR-TB | None | SRR8217918 | HR-TB | None | ERR3283014 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | ERR752229 | Other | lineage4.5 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None |
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