lineage | Count |
---|---|
lineage4.9 | 41 |
lineage4.9;lineage7 | 2 |
lineage4.6.4;lineage4.9 | 1 |
lineage4.3.2;lineage4.9 | 1 |
lineage2.2.1 | 11 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4 | 3 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 1 |
La2;lineage4.9 | 1 |
lineage4.9;lineage9 | 2 |
La3;lineage4.9 | 10 |
La1.2;La1.8.1 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage3.1.2.2 | 1 |
lineage3 | 2 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
lineage2.2.1.1 | 4 |
lineage1.1.1;lineage4 | 1 |
lineage4.6.3;lineage4.9 | 2 |
lineage4.1.2.1 | 3 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.6.1.1 | 2 |
M.canetti;lineage4.2;lineage4.9 | 2 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage4.1;lineage4.9 | 1 |
La3;lineage2.1;lineage4.9 | 1 |
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
La1.7;lineage4.9;lineage7 | 2 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.7.1 | 1 |
lineage4.2.1.1 | 1 |
lineage2.1;lineage4.9 | 1 |
M.canetti;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage2.2 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage1.1.3.1 | 1 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
2 | |
M.canetti;lineage4.2 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR19295647 | Sensitive | lineage4.9 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR11252736 | Other | lineage4.9 | None |
SAMN02585910 | Other | lineage2.2.1 | None |
ERR369158 | Other | lineage4.9 | None |
SRR3675265 | Other | lineage4 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
ERR6358979 | Other | lineage4.9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
ERR363421 | Sensitive | lineage4.9 | None |
ERR6359066 | HR-TB | lineage4.9 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
ERR3283031 | Sensitive | La3;lineage4.9 | None |
SRR6046897 | Sensitive | lineage4.9 | None |
SRR7240033 | Other | La1.2;La1.8.1 | None |
SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR4798504 | RR-TB | lineage3 | None |
ERR349299 | Other | lineage4.9 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR108471 | HR-TB | lineage4.9 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR26937107 | MDR-TB | lineage2.2.1 | None |
ERR373947 | Other | lineage4.9 | None |
SRR1184024 | RR-TB | lineage2.2.1.1 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
SRR1183145 | Other | lineage2.2.1 | None |
ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
SRR1180270 | Other | lineage2.2.1 | None |
SRR26159047 | Other | lineage4.6.3;lineage4.9 | None |
ERR212033 | Other | lineage4.9 | None |
ERR4818536 | Other | lineage4.9 | None |
SRR10808730 | Other | lineage4.9 | None |
ERR4829606 | Sensitive | lineage4.1.2.1 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
SRR6045503 | Sensitive | lineage4.9 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
ERR1199132 | Sensitive | lineage4.6.1.1 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
ERR363453 | Sensitive | lineage4.9 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
SRR1792478 | HR-TB | La1.7.1 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
ERR3797048 | Other | La3;lineage4.9 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR4178309 | Other | lineage4.1.2.1 | None |
ERR363506 | Sensitive | lineage4.9 | None |
SRR1165628 | Other | La3;lineage4.9 | None |
SRR6832178 | HR-TB | lineage4.2.1.1 | None |
SRR1181251 | Other | lineage2.2.1 | None |
ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
SRR5341345 | Sensitive | lineage4.9 | None |
ERR349265 | Other | lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
SRR1169306 | Other | La3;lineage4.9 | None |
ERR363449 | Sensitive | lineage4.9 | None |
SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
ERR6865513 | Other | lineage4.1.2.1 | None |
ERR349298 | Sensitive | lineage4.9 | None |
SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
ERR8975532 | HR-TB | lineage4.3.2.1 | None |
SRR29097066 | Sensitive | lineage4.9 | None |
SRR1180172 | Other | lineage2.2.1 | None |
SRR26159066 | Sensitive | lineage4.9 | None |
ERR1034634 | HR-TB | lineage4.9 | None |
SRR6045706 | Sensitive | lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR6045892 | Sensitive | lineage4.9 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
ERR349264 | Sensitive | lineage4.9 | None |
ERR4819462 | Sensitive | lineage4.9 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
ERR6866410 | Sensitive | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
ERR987765 | Sensitive | lineage4.6.1.1 | None |
ERR323115 | Sensitive | lineage4.9 | None |
SRR1169249 | Other | lineage4.9 | None |
SRR29097004 | Other | lineage3 | None |
ERR3283014 | Sensitive | La3;lineage4.9 | None |
ERR6865502 | Sensitive | lineage4 | None |
ERR3283047 | Sensitive | La3;lineage4.9 | None |
SRR29050770 | Sensitive | lineage4.9 | None |
ERR4178226 | Sensitive | lineage4 | None |
ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
ERR3283011 | Other | La3;lineage4.9 | None |
SRR20970043 | MDR-TB | lineage2.2.1 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
ERR3797064 | Other | La3;lineage4.9 | None |
SRR1181091 | Other | lineage2.2.1.1 | None |
ERR176643 | Other | La3;lineage4.9 | None |
ERR363445 | Other | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
ERR363502 | Other | lineage4.9 | None |
SRR1183111 | HR-TB | lineage4.9 | None |
ERR779852 | Sensitive | lineage4.9 | None |
ERR373946 | Sensitive | lineage4.9 | None |
SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
SRR1183144 | Other | lineage2.2.1 | None |
SRR12708416 | Sensitive | None | |
ERR3283057 | Sensitive | La3;lineage4.9 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
ERR987722 | MDR-TB | None | |
ERR349330 | Sensitive | lineage4.9 | None |
SRR1180226 | HR-TB | lineage4.9 | None |