EBG00000313325 - n.1284C>T
Drug resistance types
161 Sensitive
8 RR-TB
13 HR-TB
13 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
136 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 14 |
| lineage4.9 | 95 |
| lineage4.1.2.1 | 15 |
| lineage3 | 19 |
| lineage2.2.1 | 38 |
| La1.7.1 | 1 |
| lineage4.3 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.3.3 | 18 |
| lineage4.3.2.1 | 11 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2 | 10 |
| La1.3 | 4 |
| lineage4 | 6 |
| lineage4.3.4.2.1 | 8 |
| lineage3.1.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.5 | 4 |
| lineage4.4.1.1 | 13 |
| lineage4.2.2.2 | 1 |
| La1.8.1 | 16 |
| La1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage1.1.3.2 | 2 |
| lineage4.3.2 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 3 |
| La1.2.BCG | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.7 | 4 |
| lineage1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 3 |
| lineage2.2;lineage4.5 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.2 | 2 |
| La1.8.X-unk6 | 1 |
| lineage1.1.1;lineage4 | 1 |
| 3 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3;lineage4 | 1 |
| lineage3.1.2.2 | 2 |
| La1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 340 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513619 | Sensitive | lineage4.8 | gb | SRR6045205 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR2515484 | Sensitive | lineage4.8 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR228180 | Sensitive | lineage3 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR2100537 | Sensitive | lineage3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR349265 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR6855718 | Other | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR7070293 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR9971223 | Other | lineage2.2.1 | None | ERR4811031 | Other | lineage4.5 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6981981 | Sensitive | lineage4.3.3 | None | ERR2515460 | Other | lineage4.8 | za | ERR349264 | Other | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045371 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR2515055 | Sensitive | lineage3 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR5087606 | Other | La1.8.1 | None | SRR3675522 | Other | lineage4.9 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR13199734 | Other | La1.2 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6045706 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4024603 | Sensitive | lineage4.3.2 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | ERR4829337 | Sensitive | lineage4.8 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | ERR4178226 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR6982198 | HR-TB | lineage1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR363447 | Other | lineage4.9 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR2514533 | Sensitive | lineage4.9 | None | ERR4819324 | Other | lineage4.8 | gb | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR7240537 | Other | La1.8.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR5162118 | Other | La1.8.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | ERR4831763 | HR-TB | lineage2.2;lineage4.5 | None | ERR4821761 | Other | lineage3 | gb | SRR7240324 | Other | La1.8.1 | None | ERR4818104 | Sensitive | lineage4.1.2 | gb | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR6982092 | Other | lineage4.3.2.1 | None | SRR7070320 | Other | lineage4.8 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR7236178 | Other | La1.8.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR13180204 | Other | lineage3 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101827 | Other | lineage4.3.4.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2179857 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR14296220 | Other | La1.8.1 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR373946 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11662694 | Other | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4820723 | Other | lineage4.4.1.1 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | ERR4188253 | Other | La1.8.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR4817189 | Other | lineage4.7 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4820891 | Sensitive | lineage4.9 | gb | ERR3468488 | Other | La1.8.1 | None | SRR6982484 | Other | lineage3.1.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR2101636 | Other | lineage4.3.2.1 | None | ERR2513743 | Other | lineage4.1.2 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | ERR4819593 | Sensitive | lineage4.5 | None | ERR4769555 | Sensitive | La1.3 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR3675266 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR7240448 | Other | La1.8.1 | None | ERR2515032 | Other | lineage3 | None | ERR2446382 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR7240420 | Other | La1.8.X-unk6 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6981939 | Other | lineage4.3.4.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR363479 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | ERR349266 | Other | lineage4.9 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4820746 | Other | lineage3 | None | SRR6982196 | Sensitive | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR4819166 | Other | lineage3 | gb | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR4814952 | Sensitive | lineage3 | None | ERR369162 | Other | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR21728339 | Other | lineage3 | None | ERR4188010 | Other | La1.8.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR6856094 | Other | lineage2.2.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR6865562 | Sensitive | lineage4.3.2 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR369163 | Other | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | SRR3675580 | Sensitive | lineage4.9 | None | ERR2514834 | Sensitive | lineage4.7 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6982328 | Other | lineage3.1.1 | None | SRR21764246 | Other | lineage4.9 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR4769552 | Sensitive | La1.3 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR10465952 | Sensitive | lineage4.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | ERR373947 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR5162133 | Sensitive | La1.8.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR369159 | Other | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR7236240 | Other | La1.8.1 | None | ERR363446 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR4817069 | RR-TB | None | SRR6982050 | Other | lineage4.3.4.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6044952 | Other | lineage4.9 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR363449 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR4769408 | Other | La1.3 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR369151 | Other | lineage4.9 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR400320 | Sensitive | lineage4.9 | None | ERR4816243 | Sensitive | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None |
|---|
