EBG00000313325 - n.1284C>T


Drug resistance types
193 Sensitive 20 RR-TB 17 HR-TB 18 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 171 Other
lineage Counts
lineage Count
lineage4.3.3 22
lineage4.4 1
lineage4.1.1 8
15
lineage1 1
lineage4.3.2.1 14
lineage2.2.1 50
lineage2.2.2 1
lineage4.4.1.1.1 2
lineage3.1.1 5
lineage4.7 5
lineage4.3.4.2.1 11
lineage4.4.1.1 11
lineage4.8 21
lineage4.1.2 11
lineage4.9 59
lineage2.2 3
lineage4.3.4.1 2
lineage4.3 3
lineage3 29
La1.8.1 11
lineage4.3.4.2 1
lineage4.1.2.1 27
lineage4.1.1.3 4
lineage4 55
lineage4.3.2 5
lineage5.1.2 1
lineage4.9;La1.8 1
La1.3 8
lineage4.9;La1.3 3
lineage3.1.2.2 1
lineage4.5 4
lineage4.3.1.1 3
lineage4.8.1 1
lineage4.2.2.1 1
La1.2 1
La1.7.1 1
lineage4.9.1 1
lineage4.1.2;lineage3.1 1
lineage1.1.3.2 2
lineage2.2.1.1 1
lineage1.1.3 1
lineage4.1 4
lineage1.1.3.1 2
lineage1.1.2 5
lineage4.6 1
lineage4.8.2 1
lineage3.1.2.1 2
lineage4.6.2.2 2
lineage4.2.1 3
lineage5.1.4 1
lineage4.1.4 1
La3 2
lineage4.2.2.2 1
lineage4.5;lineage2.2 1
lineage4.1.1.2 1
spoligotype Counts
spoligotype Count
None 435
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6982190 Sensitive lineage4.3.3 None
SRR6982195 RR-TB lineage4.4 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982196 Sensitive None
SRR6982198 HR-TB lineage1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6982227 Other lineage4.1.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982494 Other lineage2.2.2 None
SRR6982292 Other lineage4.4.1.1.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6855718 Sensitive lineage4.8 None
SRR6855695 Sensitive lineage4.8 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6981981 Other lineage4.3.3 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6981966 Other lineage2.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982035 Sensitive lineage4.9 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6855917 Other lineage4.8 None
SRR6982011 Other lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982394 Sensitive lineage4.3.2.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982033 Sensitive lineage2.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982056 Sensitive lineage4.3.4.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982405 Sensitive None
ERR4815784 Other lineage2.2.1 gb
SRR6856032 Sensitive lineage2.2.1 None
SRR6982075 Sensitive lineage3 None
SRR6982076 Sensitive lineage4.9 None
ERR5162133 Other La1.8.1 None
ERR5087606 Other La1.8.1 None
ERR5162118 Other La1.8.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR502943 HR-TB None
ERR037234 Sensitive lineage4.9 None
ERR5311080 Other La1.8.1 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR6982514 Sensitive lineage4.3.3 None
ERR4818104 Sensitive lineage4.1.2 gb
SRR9971223 Other lineage2.2.1 None
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR4819166 Other lineage3 gb
ERR4819324 Other lineage4.8 gb
ERR1023502 MDR-TB lineage2.2.1 None
ERR10465952 Sensitive lineage4.1.2.1 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796636 Other lineage4.1.2.1 None
ERR4821761 Other lineage3 gb
ERR4820891 Sensitive lineage4.9 gb
ERR349296 Sensitive lineage4 None
ERR2513082 Other lineage4.1.2.1 gb
ERR3468488 RR-TB La1.8.1 None
ERR349266 Sensitive lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR3335798 MDR-TB lineage2.2.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR3804154 Sensitive lineage4.1.2.1 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR4024603 Sensitive lineage4.3.2 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400326 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4178226 Sensitive lineage4 None
ERR4188010 Other La1.8.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188253 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4627379 Other La1.8.1 None
ERR4769404 Other La1.3 None
ERR4627392 Other La1.8.1 None
ERR4769419 Other lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769507 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769506 Sensitive La1.3 None
ERR2515077 Sensitive lineage3 gb
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR4769551 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR2514351 Sensitive lineage3 gb
ERR4797350 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR2513619 Sensitive lineage4.8 gb
ERR2513904 Other lineage3.1.2.2 gb
ERR4797313 HR-TB None
ERR2515460 Sensitive lineage4.8 za
ERR4798431 HR-TB None
ERR4811030 Sensitive None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR6865513 Other lineage4.1.2.1 None
ERR2515191 Other lineage2.2.1 za
ERR5979454 Pre-XDR-TB lineage3 None
ERR6865502 Sensitive lineage4 None
ERR4812155 Sensitive None
ERR2515916 Sensitive lineage4.3.4.2.1 za
ERR6865562 Sensitive lineage4.3.2 None
ERR9117747 HR-TB lineage4.8 None
ERR8025347 Sensitive lineage4.9 None
ERR9117711 Other lineage4.3.4.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
ERR9117760 HR-TB lineage4.3 None
ERR9786447 Sensitive lineage4.1.2.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
ERR9117812 Other lineage4.3.1.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR13180204 Sensitive lineage3 None
SRR11972447 Pre-XDR-TB lineage2.2.1 None
SRR13180205 Sensitive lineage4.1.2.1 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13199734 Other La1.2 None
SRR14296220 Other La1.8.1 None
SRR15276982 Pre-XDR-TB lineage3 None
SRR17856664 Sensitive lineage3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR13861519 Other lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18391772 Other La1.7.1 None
SRR18213721 Other lineage4.8 None
SRR19303985 Other lineage4.8 None
SRR19303805 Other lineage4.8 None
SRR18912069 Other lineage4.1.2.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101643 Other lineage2.2.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101666 Sensitive lineage4.8 None
SRR2101681 Sensitive lineage4.8 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101691 Other lineage2.2.1 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101711 Sensitive lineage2.2.1 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR2101827 Sensitive lineage4.3.4.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR3675455 Sensitive lineage4 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21728339 Other lineage3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21711124 Other lineage1.1.3 None
SRR21737226 Sensitive lineage4.5 None
SRR21764246 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR3675473 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675474 Other lineage4.1.1 None
ERR4815613 Other lineage3 None
SRR3675472 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
ERR4814554 Other lineage4.1 None
ERR4815452 Other lineage4.3.3 None
ERR4814617 Other lineage1.1.3.1 None
SRR3675230 RR-TB lineage3 None
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
SRR3675209 Sensitive lineage4.9 None
ERR3275450 Other lineage4 None
ERR4819579 HR-TB lineage4.3.3 None
SRR3675247 Other lineage4.9 None
SRR3675249 Sensitive lineage4.9 None
ERR4814952 Sensitive lineage3 None
SRR3675245 Other lineage4.1.2.1 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
ERR2179857 RR-TB lineage4 None
SRR3675266 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675514 Sensitive lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
ERR4815080 Other lineage4.1.2.1 None
ERR4815556 RR-TB lineage3 None
ERR4817342 Other lineage4.1.1 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
ERR4816243 Sensitive lineage3 None
SRR3675548 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
ERR4816232 Other lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR4816270 Other lineage4.1.2.1 None
ERR4817069 RR-TB None
ERR4816417 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR4816462 Other lineage4.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4816571 Other lineage1.1.2 None
ERR4816699 Other lineage4.6 None
ERR4817398 Other lineage3.1.1 None
ERR4816627 Other lineage2.2 None
ERR4817189 Other lineage4.7 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR4817263 Sensitive lineage4.9 None
ERR4816818 Other lineage4.8.2 None
ERR4816882 Other lineage4.8 None
ERR4817685 Sensitive lineage3 None
ERR4817310 Other lineage4.9 None
ERR4817874 Other lineage3 None
ERR4818655 Other lineage4.3.3 None
ERR228175 Sensitive lineage3 None
ERR4817710 Other lineage1.1.2 None
ERR2513413 Other lineage3.1.2.1 None
ERR228180 Sensitive lineage3 None
ERR4817998 Other lineage3 None
ERR4819075 Other lineage4.1.2.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4819011 Other lineage3.1.2.1 None
ERR2513433 Other La1.8.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR2515055 Other lineage3 None
ERR4818190 Other lineage4.8 None
ERR4818810 Other lineage2.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4819087 Other lineage4.3.3 None
ERR4819078 Other lineage4.3.3 None
ERR4818272 Other lineage4.3.2 None
ERR2512770 Other lineage4.2.1 None
ERR4818407 Other lineage4.3.2 None
ERR3275941 RR-TB lineage4.3 nl
ERR2513273 Other lineage4.1.2.1 None
ERR4818548 Other lineage4.3.3 None
ERR2513283 Other lineage5.1.4 None
ERR4818556 Other lineage3 None
SRR2100532 Sensitive lineage3 None
ERR4818570 Other lineage4.3.3 None
ERR2512941 Other lineage1.1.2 None
ERR4819191 Other lineage4.6.2.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR2100537 Sensitive lineage3 None
ERR2513743 Other lineage4.1.2 None
SRR5341396 Other lineage4 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819198 Other lineage2.2.1 None
ERR4819313 Other lineage3.1.1 None
ERR4819328 Sensitive lineage4.3.3 None
ERR2513924 RR-TB lineage4.8 None
ERR2515484 Other lineage4.8 None
ERR2515721 Sensitive lineage4.3.2.1 None
ERR4820746 RR-TB lineage3 None
ERR4819593 Other lineage4.5 None
ERR4819553 Other lineage4.1.4 None
ERR2514515 Other lineage4.2.1 None
SRR5341437 Sensitive lineage4.9 None
SRR2101636 Other lineage4.3.2.1 None
ERR2514533 Other lineage4.9 None
ERR2515854 Sensitive lineage2.2.1 None
SRR5341296 Sensitive lineage4.9 None
SRR2101661 Sensitive lineage4.1 None
SRR2101659 Other lineage4.4.1.1.1 None
SRR2101709 Sensitive lineage4.1.1.3 None
ERR2514834 Other lineage4.7 None
SRR5341323 Sensitive lineage4 None
ERR2446382 Other lineage4 None
ERR4819952 Sensitive La3 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR2514968 Other lineage4.3.3 None
ERR4820020 Sensitive lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR2515032 Other lineage3 None
ERR2515148 Sensitive lineage4.3.3 None
ERR4820043 Sensitive lineage4.1.2.1 None
ERR4820075 Other lineage4.1.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4820151 RR-TB lineage4.8 None
ERR4820194 Other La3 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR2515230 Sensitive lineage4.8 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821775 Other lineage4 None
ERR2517475 Other lineage4 None
ERR2660490 Sensitive lineage4.3.2.1 None
SRR6045503 HR-TB None
SRR6045516 Other lineage3.1.1 None
ERR4821286 Other lineage4.8 None
ERR4821360 Other lineage4.1.2.1 None
ERR4821325 Other lineage3 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821610 Other lineage4.3.2 None
ERR4821616 Other lineage1.1.3.1 None
SRR6045706 Sensitive lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045726 Other lineage3 None
SRR6044925 Sensitive lineage4.9 None
SRR6044784 MDR-TB lineage3 None
SRR6044819 Sensitive lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045205 Sensitive lineage4.9 None
SRR6046208 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046050 Other lineage4.3.3 None
SRR6046343 Other lineage2.2.1 None
SRR6046245 Other lineage4.9 None
SRR6046359 Other lineage4.7 None
SRR6046250 Other lineage4.9 None
ERR2851371 Other lineage4.9 None
ERR2851359 Other lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
ERR4829337 Other lineage4.8 None
SRR6046534 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
SRR6046802 Other lineage4 None
ERR4831638 Sensitive None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046897 Sensitive lineage4 None
SRR6982078 Sensitive None
SRR6982090 RR-TB lineage4.4.1.1 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR6982088 Other lineage4.1.1.2 None
SRR6856087 Sensitive lineage4 None
SRR6982092 Other lineage4.3.2.1 None
SRR6856094 Other lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982102 Other lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982106 Sensitive lineage4.8 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982140 Other lineage2.2 None
SRR6896255 Sensitive lineage4.3.3 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6982148 Sensitive lineage2.2.1 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982170 Sensitive lineage4.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982430 Other lineage4.3.4.2.1 None