Rv0668 - c.3498C>G
Drug resistance types
51 Sensitive
8 RR-TB
56 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| La1.7;lineage4.9 | 4 |
| lineage4.9 | 119 |
| lineage4.1.1.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage3 | 7 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage2.2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage2.1;lineage4.9 | 4 |
| lineage4 | 4 |
| lineage4.1;lineage4.8 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1;lineage4.9 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.6.2.2 | 2 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| 2 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.8 | 3 |
| La2;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| La1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971114 | Other | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR926165 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR926157 | Other | lineage4.9 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR990545 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4811030 | Other | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR926163 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR363447 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR373947 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR349300 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816470 | HR-TB | lineage3 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR363498 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR3675448 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR363453 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR363499 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR926160 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR6789626 | Other | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None |
|---|
