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SRA data
Rv0001
- c.955_957delAGAinsCGT
Drug resistance types
10 Sensitive
0 RR-TB
1 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
8
lineage4.5
1
lineage4.9;lineage9
1
M.canetti;lineage4.9
1
lineage2.2.1
1
La1.6;lineage4
1
La1;lineage2;lineage4.9
1
La1.7;M.canetti;lineage4.9
1
lineage4.4.1.1
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR176651
Other
lineage4.9
None
ERR2693252
Sensitive
lineage4.9
None
ERR4797313
Sensitive
lineage2.2.1
None
ERR4811030
Sensitive
lineage4.9
None
ERR4811031
Sensitive
lineage4.5
None
ERR6358979
Other
lineage4.9
None
SRR12708398
Sensitive
lineage4.4.1.1
None
SRR28351554
Sensitive
La1.6;lineage4
None
SRR3675279
Sensitive
lineage4.9
None
Showing 1 to 10 of 16 entries
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