Rv0667 - c.1926C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
52 Sensitive
1 RR-TB
24 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 69 |
| lineage2.2.1.2 | 1 |
| La1.7;lineage4.9 | 7 |
| La3;lineage4.9 | 5 |
| lineage4.3.2 | 3 |
| lineage4.9;lineage7 | 5 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1 | 3 |
| lineage4 | 2 |
| lineage4.3.4 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4.7 | 6 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| La1.7 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096107 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR9121620 | Sensitive | lineage4.3.2 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR926163 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR29273893 | MDR-TB | lineage4.7 | None | ERR363502 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR29273776 | Pre-XDR-TB | lineage4.7 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4195342 | Sensitive | lineage4.3.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR29274145 | Pre-XDR-TB | lineage4.7 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR22251562 | Sensitive | lineage4.3.2 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28646103 | MDR-TB | lineage4.7 | None | ERR349264 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR10525357 | Pre-XDR-TB | lineage4.7 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR29273659 | MDR-TB | lineage4.7 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR29097023 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None |
|---|
