Rv0006 - c.1491G>C
Drug resistance types
17 Sensitive
2 RR-TB
20 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 37 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.1 | 2 |
| La1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage4.9 | 6 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| 2 | |
| La2;lineage2.2 | 1 |
| lineage4.9;lineage7 | 2 |
| La1.7 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 4 |
| lineage1.1.1;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.5 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR400345 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | SRR29096410 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
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