EBG00000313339 - n.1552G>A
Drug resistance types
80 Sensitive
0 RR-TB
14 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4 | 1 |
| lineage4.9 | 81 |
| lineage4.3.4.1 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La3;lineage4.9 | 10 |
| lineage2.2.2 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1 | 9 |
| lineage4.3 | 1 |
| La3;M.canetti | 8 |
| lineage4.9;lineage7 | 1 |
| lineage2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| 1 | |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 138 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR752229 | Other | lineage4.5 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | ERR926154 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR28741112 | MDR-TB | lineage2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7240033 | Other | La1.8.1 | None | ERR176751 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR373947 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | ERR1336826 | Sensitive | La3;M.canetti | None | SRR1915487 | Other | La1.2.BCG | None | ERR212033 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR1336823 | Sensitive | La3;M.canetti | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None |
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