Rv0005 - c.1977G>C


Drug resistance types
35 Sensitive 5 RR-TB 64 HR-TB 40 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 121 Other
lineage Counts
lineage Count
lineage3.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage2.2;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 11
lineage4.9 59
lineage1.1 1
lineage4.1.2.1 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
13
lineage2.2.1 10
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 3
lineage4.3.4.2.1 1
La1.7;M.canetti;lineage4.9 4
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9 16
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.9 10
lineage4.9;lineage6.3 8
La1.2.BCG;La1.8.1 1
M.canetti;lineage2.1;lineage4.9 13
lineage4.5 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La3;lineage2.1;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La1.7;lineage4.9 3
lineage4 2
La3;lineage4.9 9
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 3
lineage3.1.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage3 3
lineage4.1.3 2
M.canetti;lineage2.1;lineage6.3 2
lineage2.2.1.1 3
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
M.canetti;lineage4.2 1
lineage5.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1.2 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage4.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 1
lineage4.3.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.9 2
lineage1.1;lineage4 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7 1
La1;lineage4.9 1
La3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
spoligotype Counts
spoligotype Count
None 269
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184346 HR-TB lineage3.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9787197 Other None
ERR234659 Other None
ERR4817060 Other None
ERR369159 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR369156 Sensitive lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR363498 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4815604 Other None
ERR1035157 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6789626 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3283011 Other La3;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7535086 Other None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR702406 Other lineage2.1 None
SRR6046594 Sensitive lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR3675232 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819322 Other lineage1.1;lineage4 None
ERR363490 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR13232473 Sensitive lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1184294 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR363456 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
ERR212033 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369162 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4821179 Other lineage4.1.2.1 gb
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797069 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816999 Other None
SRR6045219 HR-TB lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800341 Other lineage3 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR3797064 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None