Rv0668 - c.3165C>G
Drug resistance types
37 Sensitive
7 RR-TB
13 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 36 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 1 |
| 2 | |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage3 | 3 |
| lineage2.2.1 | 7 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.2.1.1 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR29017081 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR6046485 | Other | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR4820112 | Sensitive | lineage4.1.1.1 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29055611 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | SRR5341456 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675284 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR2446566 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR12015085 | Other | lineage4.8 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7496523 | Other | lineage4.7 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR12015084 | Other | lineage4.8 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
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