Rv3596c - c.891C>G
Drug resistance types
108 Sensitive
13 RR-TB
43 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| 47 | |
| lineage3 | 8 |
| lineage4.1.1 | 1 |
| lineage4.9 | 76 |
| lineage4 | 55 |
| lineage4.1 | 2 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2 | 6 |
| lineage4.6.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1 | 9 |
| lineage4.8.1 | 1 |
| lineage4.9.1 | 1 |
| La1.8.1 | 1 |
| La1.3 | 5 |
| lineage5.1.2 | 1 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
| lineage4.5 | 2 |
| lineage4.3.3 | 1 |
| La3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.4.2 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 245 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675387 | Sensitive | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4819462 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514125 | Other | lineage3 | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693231 | Other | None | ERR4821057 | HR-TB | lineage4 | None | ERR2693257 | Other | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | ERR4821214 | RR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045086 | Other | lineage3 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831716 | HR-TB | lineage1.1.1.1 | None | SRR8217918 | HR-TB | None | ERR502943 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR400336 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4769514 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4799025 | Pre-XDR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR9786843 | Other | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR9896144 | Other | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1169306 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR17658565 | Other | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None |
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