Rv0006 - c.2055G>C
Drug resistance types
19 Sensitive
0 RR-TB
14 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 23 |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 4 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176741 | Other | lineage4.9 | None | SRR29096276 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR29097023 | Sensitive | lineage4.9 | None | SRR29096107 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | ERR176751 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR29096166 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR29097004 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR752229 | Other | lineage4.5 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR29053433 | Sensitive | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR19324962 | Sensitive | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR29096203 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797048 | Other | La3;lineage4.9 | None |
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