Rv1630 - c.429G>T
Drug resistance types
53 Sensitive
14 RR-TB
56 HR-TB
15 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1 | 1 |
| 2 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage2.2.1 | 25 |
| lineage4.9 | 104 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.2.1 | 3 |
| lineage6.1.3 | 2 |
| lineage4.1.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.7 | 2 |
| lineage3 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4 | 5 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.3 | 6 |
| La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage4.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351442 | HR-TB | lineage3.1 | None | SRR12708416 | Sensitive | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4797474 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5341298 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR7535082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR7070496 | Sensitive | lineage4.7 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR323062 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR5341453 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR2514712 | Sensitive | lineage4.7 | gb | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4817047 | Sensitive | lineage4.2.2.1 | gb | SRR5341345 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR1063855 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR3675318 | Other | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4829333 | Other | lineage4 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None |
|---|
