lineage | Count |
---|---|
lineage4.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4 | 25 |
34 | |
lineage4.9 | 10 |
lineage4.8 | 1 |
lineage4.2.1.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.4.1.2 | 1 |
lineage2.2.1 | 3 |
lineage4.5 | 1 |
La1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage3 | 1 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR158583 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675279 | Other | None | SRR6046133 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341299 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6046644 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323108 | HR-TB | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6198317 | Other | La1.2 | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR4811030 | Sensitive | None | ERR6359045 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR10808399 | Sensitive | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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