EBG00000313339 - n.1472G>A
Drug resistance types
136 Sensitive
30 RR-TB
22 HR-TB
48 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 75 |
| lineage4 | 57 |
| La1.8.1 | 16 |
| La1.8 | 1 |
| lineage5.1.2 | 1 |
| lineage4.1.2.1 | 12 |
| lineage4.1.1.3 | 6 |
| La1.3 | 2 |
| La1 | 1 |
| La1.2 | 1 |
| 16 | |
| lineage2.2.1 | 26 |
| lineage1.1.3.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.5 | 3 |
| lineage1.2.2.2 | 5 |
| lineage4.3.3 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6 | 1 |
| lineage4.7 | 2 |
| lineage4.4.1.2 | 3 |
| lineage5.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage3 | 13 |
| lineage4.8 | 9 |
| lineage4.3.2.1 | 6 |
| lineage4.1.2 | 5 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.1.2 | 2 |
| La1.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1 | 1 |
| lineage4.9.1 | 3 |
| lineage2.2 | 2 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage1.1.3.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.1 | 3 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 336 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797007 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4187819 | Other | La1.8 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4188160 | Other | La1.8.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR5864958 | MDR-TB | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5865432 | MDR-TB | lineage2.2.1 | None | ERR5908261 | Sensitive | lineage1.2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR718384 | MDR-TB | lineage4.5 | th | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1180446 | Other | lineage4.9 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR17832798 | Other | lineage3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176756 | Sensitive | lineage4.9.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR3275450 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | ERR176619 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675522 | Other | None | ERR4815589 | Sensitive | lineage4.8.2 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR1200631 | Sensitive | lineage7 | et | ERR4816458 | Other | lineage1.2.2.2 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR2229197 | Sensitive | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR4818637 | Other | lineage4.8 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819131 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341430 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4820484 | Other | lineage4.8 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR6045503 | HR-TB | None | ERR4821588 | Sensitive | lineage4.1.1.3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR4821568 | Other | lineage4.3.4.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045086 | Other | lineage3 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR4829013 | Sensitive | lineage4.8 | it | SRR6046376 | Other | lineage3 | None | SRR6046245 | Other | lineage4.9 | None | ERR4829500 | Sensitive | lineage4.1.2.1 | it | ERR4829238 | Sensitive | lineage3 | None | ERR4830668 | MDR-TB | lineage4.1.2.1 | dz | ERR4830672 | MDR-TB | lineage4.3.1 | dz | ERR4829573 | Sensitive | lineage4.7 | it | SRR6046555 | Sensitive | lineage3.1.1 | gb | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4831967 | HR-TB | lineage2.2.1 | vn | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6982415 | HR-TB | lineage4.9.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502943 | HR-TB | None | ERR5087606 | Other | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR5311088 | Other | La1.8.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8600071 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None |
|---|
