EBG00000313339 - n.1472G>A
Drug resistance types
99 Sensitive
19 RR-TB
11 HR-TB
21 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 3 |
| lineage4.3.4.2.1 | 8 |
| lineage4.9 | 130 |
| lineage2.2.1 | 14 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 3 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4 | 3 |
| lineage3 | 8 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| La1.8.1 | 3 |
| La1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.6.1.1 | 2 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.6.1.2 | 4 |
| lineage2;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.1 | 2 |
| lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8 | 4 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| 1 | |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.3 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage5.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR124451 | Sensitive | lineage2.2.2 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR6045503 | Other | lineage4.9 | None | SRR1208249 | Sensitive | lineage4.9 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR1208450 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1208377 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1208422 | Other | lineage4.9 | None | SRR1792247 | Other | La1.7.1 | None | ERR373945 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR1181256 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR5341430 | Other | lineage3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR1208194 | Other | lineage4.9 | None | SRR1208313 | Other | lineage4.9 | None | SRR1208694 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR718384 | MDR-TB | lineage4.5 | th | SRR11662694 | Other | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR1208573 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR5311077 | Other | La1.8.1 | None | ERR4769436 | Other | La1.3 | None | SRR1208800 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797007 | Other | La1.8.1 | None | SRR1202399 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1208535 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR4033549 | Other | lineage2.2.2 | None | ERR363447 | Other | lineage4.9 | None | SRR1208783 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SRR1208470 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR1202603 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR1208669 | Sensitive | lineage4.9 | None | SRR1202435 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1200631 | Sensitive | lineage7 | et | ERR176619 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1208989 | Sensitive | lineage4.9 | None | ERR11466361 | Sensitive | lineage4.3.4.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1209021 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR5341460 | Other | lineage3 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1175474 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR1208555 | Sensitive | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1208577 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1208673 | Sensitive | lineage4.9 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1202396 | Other | lineage4.9 | None | SRR1208290 | Sensitive | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | SRR1208195 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | ERR363490 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1184329 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR12199468 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1208499 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1208686 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR1202557 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1208815 | Sensitive | lineage4.9 | None | SRR1208882 | Sensitive | lineage4.9 | None | SRR1208670 | Sensitive | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR363449 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1208924 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR17832798 | Sensitive | lineage3 | None | SRR1202523 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR1208432 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1208464 | Other | lineage4.9 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | lineage4.9 | None | SRR1208879 | Sensitive | lineage4.9 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR7131160 | Sensitive | lineage3 | None | ERR4818904 | Other | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | SRR1208639 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1202415 | Sensitive | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR349264 | Other | lineage4.9 | None | SRR1202375 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR6045706 | Other | lineage4.9 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR1208744 | Other | lineage4.9 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR1208645 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR2517475 | Other | lineage4 | None | ERR363500 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None |
|---|
