Rv0001 - c.682_684delTTGinsCTC


Drug resistance types
18 Sensitive 0 RR-TB 36 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 22 Other
lineage Counts
lineage Count
3
La3;M.canetti;lineage2.1;lineage4.9 5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 16
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.2.1 1
La1.8.1 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 9
lineage2.2.2 1
lineage2.2.1 3
La3;lineage4.9 2
La1;lineage4.1.2 1
lineage4.3.3 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.1.1.1;lineage6.3 1
La1;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
lineage1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.5 1
lineage4 1
lineage2.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage4.4.1.1 1
lineage4.6.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage1.1.3.1 1
lineage2.1;lineage2.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 78
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786843 Other None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR19295647 Sensitive lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2512770 Sensitive lineage4.2.1 None
ERR3797023 HR-TB La1.8.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR10809074 Sensitive lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20632814 Sensitive lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6044815 Other lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR3468607 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR11252736 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2446566 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR12708372 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR13861400 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6046245 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR12708416 Sensitive None