lineage | Count |
---|---|
lineage4.8 | 1 |
lineage4.1.2.1 | 12 |
lineage2 | 1 |
lineage2.2.2 | 1 |
lineage4 | 12 |
lineage2.2.1.2 | 2 |
lineage4.4.1.1 | 2 |
lineage4.9 | 16 |
lineage2.2.1 | 3 |
lineage4.5 | 2 |
lineage2.2 | 2 |
48 | |
lineage4.1 | 3 |
lineage3;lineage2.1 | 1 |
lineage3 | 2 |
lineage4.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage3.1 | 2 |
lineage1.1 | 1 |
lineage4.3.4.2.1 | 1 |
La1.2 | 1 |
lineage4.3.3 | 2 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | ERR9892000 | Sensitive | lineage4.8 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR21240178 | Sensitive | lineage4.1.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR4821053 | Other | lineage3 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675558 | HR-TB | None | ERR4816656 | HR-TB | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046514 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR4831117 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3797016 | HR-TB | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None |
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