Rv3596c - c.1956C>A
Drug resistance types
26 Sensitive
0 RR-TB
18 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| La1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1 | 8 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.1.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La3;lineage4.8 | 2 |
| lineage4.3.4 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.3.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR6198317 | Other | La1.2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR28119805 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675387 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR9119066 | Sensitive | lineage4.4.1.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5908139 | Sensitive | lineage4.4.1.1 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None |
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