TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.1956C>A
Drug resistance types
26 Sensitive
0 RR-TB
18 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
31
lineage2.2.1
8
lineage4.9;lineage6.3
5
lineage2.1;lineage4.9;lineage6.3
3
lineage4.4.1.1
2
lineage4.1.2.1
2
lineage4.3.2.1
2
lineage4.1.1.3;lineage4.9
2
La3;lineage4.8
2
La3;lineage2.1;lineage4.9
2
Showing 1 to 10 of 34 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
84
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR12015083
Other
La3;lineage4.8
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR2513283
Sensitive
lineage5.1.4
None
ERR2513470
Other
lineage4.2.2.2
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR400320
Sensitive
lineage4.9
None
ERR400326
Other
lineage4.9
None
ERR400336
Sensitive
lineage4.9
None
ERR400345
Other
lineage4.9
None
Showing 1 to 10 of 84 entries
Previous
1
2
3
4
5
…
9
Next